Protein–RNA interactions for Protein: Q9UPU3

SORCS3, VPS10 domain-containing receptor SorCS3, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORCS3Q9UPU3 AC074051.2-201ENST00000565115 352 ntBASIC19.42■□□□□ 0.7
SORCS3Q9UPU3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SORCS3Q9UPU3 AC090616.6-201ENST00000582640 721 ntBASIC19.42■□□□□ 0.7
SORCS3Q9UPU3 MIR3180-5-201ENST00000583743 153 ntBASIC19.42■□□□□ 0.7
SORCS3Q9UPU3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.42■□□□□ 0.7
SORCS3Q9UPU3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SORCS3Q9UPU3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.42■□□□□ 0.7
SORCS3Q9UPU3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.42■□□□□ 0.7
SORCS3Q9UPU3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SORCS3Q9UPU3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SORCS3Q9UPU3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SORCS3Q9UPU3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SORCS3Q9UPU3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SORCS3Q9UPU3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SORCS3Q9UPU3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SORCS3Q9UPU3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 AL023284.2-201ENST00000405850 579 ntBASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 NEFHP1-201ENST00000412845 2629 ntBASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.41■□□□□ 0.7
SORCS3Q9UPU3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 MIR574-201ENST00000385209 96 ntBASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 TSPY12P-201ENST00000421279 868 ntBASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 AC064862.7-201ENST00000604520 867 ntBASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 AC112497.1-201ENST00000624824 639 ntBASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 AF228730.7-201ENST00000641842 219 ntBASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 AL032819.2-201ENST00000624543 2162 ntBASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SORCS3Q9UPU3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SORCS3Q9UPU3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SORCS3Q9UPU3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SORCS3Q9UPU3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 MCCD1P1-208ENST00000445732 328 ntBASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.39■□□□□ 0.69
SORCS3Q9UPU3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SORCS3Q9UPU3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.38■□□□□ 0.69
SORCS3Q9UPU3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SORCS3Q9UPU3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SORCS3Q9UPU3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SORCS3Q9UPU3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SORCS3Q9UPU3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SORCS3Q9UPU3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms