Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 GPS2P2-201ENST00000430745 888 ntBASIC7.52□□□□□ -1.21
MACF1Q9UPN3 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 AC006557.2-201ENST00000592985 1240 ntBASIC7.52□□□□□ -1.21
MACF1Q9UPN3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 AC004877.2-201ENST00000623941 599 ntBASIC7.52□□□□□ -1.21
MACF1Q9UPN3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 ABCD1P5-201ENST00000445663 754 ntBASIC7.52□□□□□ -1.21
MACF1Q9UPN3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 AC092552.1-201ENST00000547243 906 ntBASIC7.52□□□□□ -1.21
MACF1Q9UPN3 KRT19P2-202ENST00000557173 1012 ntBASIC7.52□□□□□ -1.21
MACF1Q9UPN3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 AL512384.1-201ENST00000406683 331 ntBASIC7.52□□□□□ -1.21
MACF1Q9UPN3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 ACTBP11-201ENST00000436287 1126 ntBASIC7.51□□□□□ -1.21
MACF1Q9UPN3 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 AL021578.1-201ENST00000613646 709 ntBASIC7.51□□□□□ -1.21
MACF1Q9UPN3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 AC009093.7-201ENST00000623853 1223 ntBASIC7.51□□□□□ -1.21
MACF1Q9UPN3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 AL671277.1-201ENST00000429656 993 ntBASIC7.51□□□□□ -1.21
MACF1Q9UPN3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MACF1Q9UPN3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
MACF1Q9UPN3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
MACF1Q9UPN3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
MACF1Q9UPN3 MYCLP1-201ENST00000372451 1075 ntBASIC7.5□□□□□ -1.21
MACF1Q9UPN3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
MACF1Q9UPN3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC7.5□□□□□ -1.21
MACF1Q9UPN3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
MACF1Q9UPN3 AC004233.3-201ENST00000607794 1269 ntBASIC7.5□□□□□ -1.21
MACF1Q9UPN3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
MACF1Q9UPN3 BCAR1-209ENST00000546196 1340 ntBASIC7.5□□□□□ -1.21
MACF1Q9UPN3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
MACF1Q9UPN3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
MACF1Q9UPN3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
MACF1Q9UPN3 GOLGA2P6-201ENST00000340929 2049 ntBASIC7.5□□□□□ -1.21
MACF1Q9UPN3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
MACF1Q9UPN3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
MACF1Q9UPN3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
MACF1Q9UPN3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
MACF1Q9UPN3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC7.5□□□□□ -1.21
MACF1Q9UPN3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC7.5□□□□□ -1.21
MACF1Q9UPN3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms