Protein–RNA interactions for Protein: Q9UMY4

SNX12, Sorting nexin-12, humanhuman

Predictions only

Length 172 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12Q9UMY4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 AC091390.4-202ENST00000476426 537 ntBASIC19.43■□□□□ 0.7
SNX12Q9UMY4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 UNC93B5-201ENST00000530315 699 ntBASIC19.43■□□□□ 0.7
SNX12Q9UMY4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX12Q9UMY4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 AC069152.1-201ENST00000438030 544 ntBASIC19.42■□□□□ 0.7
SNX12Q9UMY4 KRT16P5-201ENST00000455284 522 ntBASIC19.42■□□□□ 0.7
SNX12Q9UMY4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 AC133041.1-202ENST00000642053 222 ntBASIC19.42■□□□□ 0.7
SNX12Q9UMY4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SNX12Q9UMY4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 AP000593.1-201ENST00000393668 712 ntBASIC19.41■□□□□ 0.7
SNX12Q9UMY4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX12Q9UMY4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.4■□□□□ 0.7
SNX12Q9UMY4 AC141586.5-201ENST00000624546 2050 ntBASIC19.4■□□□□ 0.7
SNX12Q9UMY4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX12Q9UMY4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms