Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX4Q9UIU6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX4Q9UIU6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SIX4Q9UIU6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SIX4Q9UIU6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX4Q9UIU6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SIX4Q9UIU6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.69■□□□□ 0.74
SIX4Q9UIU6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX4Q9UIU6 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.69■□□□□ 0.74
SIX4Q9UIU6 AC024563.2-201ENST00000603282 481 ntBASIC19.69■□□□□ 0.74
SIX4Q9UIU6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.69■□□□□ 0.74
SIX4Q9UIU6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.69■□□□□ 0.74
SIX4Q9UIU6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SIX4Q9UIU6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX4Q9UIU6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX4Q9UIU6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX4Q9UIU6 IER3-202ENST00000376377 1350 ntBASIC19.69■□□□□ 0.74
SIX4Q9UIU6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SIX4Q9UIU6 AC104581.1-202ENST00000635932 2618 ntBASIC19.69■□□□□ 0.74
SIX4Q9UIU6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX4Q9UIU6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 AC091076.1-201ENST00000610741 619 ntBASIC19.68■□□□□ 0.74
SIX4Q9UIU6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX4Q9UIU6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 AC009113.1-201ENST00000570267 2443 ntBASIC19.67■□□□□ 0.74
SIX4Q9UIU6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 AL020996.1-203ENST00000536896 2307 ntBASIC19.67■□□□□ 0.74
SIX4Q9UIU6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 ESPNP-201ENST00000270691 2015 ntBASIC19.67■□□□□ 0.74
SIX4Q9UIU6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.67■□□□□ 0.74
SIX4Q9UIU6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SIX4Q9UIU6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.66■□□□□ 0.74
SIX4Q9UIU6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.66■□□□□ 0.74
SIX4Q9UIU6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIX4Q9UIU6 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.66■□□□□ 0.74
SIX4Q9UIU6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.66■□□□□ 0.74
SIX4Q9UIU6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SIX4Q9UIU6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SIX4Q9UIU6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.66■□□□□ 0.74
SIX4Q9UIU6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.66■□□□□ 0.74
SIX4Q9UIU6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.66■□□□□ 0.74
SIX4Q9UIU6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.66■□□□□ 0.74
SIX4Q9UIU6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SIX4Q9UIU6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIX4Q9UIU6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIX4Q9UIU6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.66■□□□□ 0.74
SIX4Q9UIU6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SIX4Q9UIU6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms