Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC00474Q9P2X8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 AP000997.3-201ENST00000623333 2250 ntBASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 AL161938.1-201ENST00000569833 2180 ntBASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 AP000523.1-201ENST00000398242 1049 ntBASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 MCCD1P1-208ENST00000445732 328 ntBASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 AL353719.1-201ENST00000566847 864 ntBASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 AC073912.3-201ENST00000624414 853 ntBASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 KRT18P22-201ENST00000402024 1347 ntBASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
LINC00474Q9P2X8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 AC079598.2-202ENST00000546624 1451 ntBASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 HIST1H2APS4-201ENST00000362070 348 ntBASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 AL109659.2-201ENST00000606809 1674 ntBASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12.03□□□□□ -0.48
LINC00474Q9P2X8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.48
LINC00474Q9P2X8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
LINC00474Q9P2X8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00474Q9P2X8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00474Q9P2X8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00474Q9P2X8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.02□□□□□ -0.48
LINC00474Q9P2X8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms