Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TIMMDC1Q9NPL8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TIMMDC1Q9NPL8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMMDC1Q9NPL8 C2orf69P3-201ENST00000565542 1120 ntBASIC17.74■□□□□ 0.43
TIMMDC1Q9NPL8 SLC25A1P4-201ENST00000567977 778 ntBASIC17.74■□□□□ 0.43
TIMMDC1Q9NPL8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TIMMDC1Q9NPL8 AP005242.2-201ENST00000580065 1175 ntBASIC17.74■□□□□ 0.43
TIMMDC1Q9NPL8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.74■□□□□ 0.43
TIMMDC1Q9NPL8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
TIMMDC1Q9NPL8 AC012306.2-201ENST00000609350 630 ntBASIC17.74■□□□□ 0.43
TIMMDC1Q9NPL8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.74■□□□□ 0.43
TIMMDC1Q9NPL8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
TIMMDC1Q9NPL8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.74■□□□□ 0.43
TIMMDC1Q9NPL8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMMDC1Q9NPL8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TIMMDC1Q9NPL8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.74■□□□□ 0.43
TIMMDC1Q9NPL8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMMDC1Q9NPL8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMMDC1Q9NPL8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 CRYGFP-201ENST00000418459 633 ntBASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 FAM207BP-201ENST00000447172 505 ntBASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 AC145285.6-201ENST00000604632 637 ntBASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 AP000692.2-201ENST00000608391 879 ntBASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TIMMDC1Q9NPL8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 AC046158.3-201ENST00000624947 2558 ntBASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 LINC01568-207ENST00000641790 1380 ntBASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 FAM210CP-201ENST00000445714 574 ntBASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 KRT8P9-201ENST00000558927 1449 ntBASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMMDC1Q9NPL8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TIMMDC1Q9NPL8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMMDC1Q9NPL8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.71■□□□□ 0.43
TIMMDC1Q9NPL8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.71■□□□□ 0.43
TIMMDC1Q9NPL8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.71■□□□□ 0.43
TIMMDC1Q9NPL8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMMDC1Q9NPL8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.71■□□□□ 0.43
TIMMDC1Q9NPL8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
TIMMDC1Q9NPL8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.71■□□□□ 0.43
TIMMDC1Q9NPL8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.71■□□□□ 0.43
TIMMDC1Q9NPL8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.71■□□□□ 0.43
TIMMDC1Q9NPL8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.71■□□□□ 0.43
TIMMDC1Q9NPL8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.71■□□□□ 0.43
TIMMDC1Q9NPL8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.71■□□□□ 0.43
TIMMDC1Q9NPL8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMMDC1Q9NPL8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMMDC1Q9NPL8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TIMMDC1Q9NPL8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms