Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.62■□□□□ 0.89
CBX8Q9HC52 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX8Q9HC52 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CBX8Q9HC52 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX8Q9HC52 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX8Q9HC52 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CBX8Q9HC52 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX8Q9HC52 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.61■□□□□ 0.89
CBX8Q9HC52 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBX8Q9HC52 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBX8Q9HC52 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CBX8Q9HC52 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CBX8Q9HC52 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CBX8Q9HC52 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CBX8Q9HC52 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.61■□□□□ 0.89
CBX8Q9HC52 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBX8Q9HC52 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBX8Q9HC52 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CBX8Q9HC52 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CBX8Q9HC52 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.61■□□□□ 0.89
CBX8Q9HC52 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBX8Q9HC52 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBX8Q9HC52 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.61■□□□□ 0.89
CBX8Q9HC52 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBX8Q9HC52 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.61■□□□□ 0.89
CBX8Q9HC52 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CBX8Q9HC52 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
CBX8Q9HC52 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBX8Q9HC52 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CBX8Q9HC52 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBX8Q9HC52 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.61■□□□□ 0.89
CBX8Q9HC52 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CBX8Q9HC52 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.6■□□□□ 0.89
CBX8Q9HC52 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX8Q9HC52 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX8Q9HC52 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX8Q9HC52 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX8Q9HC52 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX8Q9HC52 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX8Q9HC52 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX8Q9HC52 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.6■□□□□ 0.89
CBX8Q9HC52 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.6■□□□□ 0.89
CBX8Q9HC52 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.6■□□□□ 0.89
CBX8Q9HC52 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.6■□□□□ 0.89
CBX8Q9HC52 AC008403.3-201ENST00000598924 454 ntBASIC20.6■□□□□ 0.89
CBX8Q9HC52 MTDHP1-201ENST00000605323 784 ntBASIC20.6■□□□□ 0.89
CBX8Q9HC52 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX8Q9HC52 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
CBX8Q9HC52 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CBX8Q9HC52 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX8Q9HC52 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.6■□□□□ 0.89
CBX8Q9HC52 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.6■□□□□ 0.89
CBX8Q9HC52 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CBX8Q9HC52 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CBX8Q9HC52 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX8Q9HC52 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CBX8Q9HC52 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
CBX8Q9HC52 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX8Q9HC52 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX8Q9HC52 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.59■□□□□ 0.89
CBX8Q9HC52 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX8Q9HC52 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CBX8Q9HC52 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.59■□□□□ 0.89
CBX8Q9HC52 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.59■□□□□ 0.89
CBX8Q9HC52 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX8Q9HC52 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.59■□□□□ 0.89
CBX8Q9HC52 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.59■□□□□ 0.89
CBX8Q9HC52 AC004980.1-204ENST00000429707 299 ntBASIC20.59■□□□□ 0.89
CBX8Q9HC52 AC091390.4-202ENST00000476426 537 ntBASIC20.59■□□□□ 0.89
CBX8Q9HC52 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX8Q9HC52 AL445675.2-201ENST00000620291 557 ntBASIC20.59■□□□□ 0.89
CBX8Q9HC52 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.59■□□□□ 0.89
CBX8Q9HC52 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX8Q9HC52 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX8Q9HC52 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX8Q9HC52 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX8Q9HC52 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.59■□□□□ 0.89
CBX8Q9HC52 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.58■□□□□ 0.89
CBX8Q9HC52 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CBX8Q9HC52 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CBX8Q9HC52 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CBX8Q9HC52 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CBX8Q9HC52 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.58■□□□□ 0.89
CBX8Q9HC52 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
CBX8Q9HC52 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.58■□□□□ 0.89
CBX8Q9HC52 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.58■□□□□ 0.89
CBX8Q9HC52 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CBX8Q9HC52 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.58■□□□□ 0.89
CBX8Q9HC52 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.58■□□□□ 0.89
CBX8Q9HC52 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
CBX8Q9HC52 AC090340.1-201ENST00000620778 4980 ntBASIC20.58■□□□□ 0.88
CBX8Q9HC52 GMCL1P1-201ENST00000463439 1581 ntBASIC20.58■□□□□ 0.88
CBX8Q9HC52 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CBX8Q9HC52 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CBX8Q9HC52 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CBX8Q9HC52 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.58■□□□□ 0.88
CBX8Q9HC52 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.58■□□□□ 0.88
CBX8Q9HC52 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CBX8Q9HC52 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.57■□□□□ 0.88
CBX8Q9HC52 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms