Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PIF1Q9H611 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.64■□□□□ 0.41
PIF1Q9H611 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.64■□□□□ 0.41
PIF1Q9H611 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PIF1Q9H611 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.64■□□□□ 0.41
PIF1Q9H611 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PIF1Q9H611 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PIF1Q9H611 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PIF1Q9H611 AL357033.4-201ENST00000617703 1807 ntBASIC17.64■□□□□ 0.41
PIF1Q9H611 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PIF1Q9H611 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.64■□□□□ 0.41
PIF1Q9H611 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.64■□□□□ 0.41
PIF1Q9H611 AC008403.3-201ENST00000598924 454 ntBASIC17.64■□□□□ 0.41
PIF1Q9H611 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.64■□□□□ 0.41
PIF1Q9H611 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PIF1Q9H611 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
PIF1Q9H611 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.64■□□□□ 0.41
PIF1Q9H611 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PIF1Q9H611 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.64■□□□□ 0.41
PIF1Q9H611 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.64■□□□□ 0.41
PIF1Q9H611 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PIF1Q9H611 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PIF1Q9H611 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PIF1Q9H611 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PIF1Q9H611 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PIF1Q9H611 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.64■□□□□ 0.41
PIF1Q9H611 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PIF1Q9H611 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PIF1Q9H611 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PIF1Q9H611 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PIF1Q9H611 REXO1L9P-201ENST00000604264 2108 ntBASIC17.63■□□□□ 0.41
PIF1Q9H611 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PIF1Q9H611 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PIF1Q9H611 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PIF1Q9H611 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PIF1Q9H611 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
PIF1Q9H611 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.63■□□□□ 0.41
PIF1Q9H611 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PIF1Q9H611 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PIF1Q9H611 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PIF1Q9H611 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PIF1Q9H611 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.63■□□□□ 0.41
PIF1Q9H611 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PIF1Q9H611 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PIF1Q9H611 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PIF1Q9H611 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.63■□□□□ 0.41
PIF1Q9H611 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PIF1Q9H611 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.63■□□□□ 0.41
PIF1Q9H611 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.63■□□□□ 0.41
PIF1Q9H611 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PIF1Q9H611 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.63■□□□□ 0.41
PIF1Q9H611 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.63■□□□□ 0.41
PIF1Q9H611 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PIF1Q9H611 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PIF1Q9H611 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.63■□□□□ 0.41
PIF1Q9H611 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.63■□□□□ 0.41
PIF1Q9H611 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.63■□□□□ 0.41
PIF1Q9H611 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
PIF1Q9H611 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.63■□□□□ 0.41
PIF1Q9H611 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.63■□□□□ 0.41
PIF1Q9H611 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.63■□□□□ 0.41
PIF1Q9H611 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PIF1Q9H611 KRT8P11-201ENST00000409686 1436 ntBASIC17.63■□□□□ 0.41
PIF1Q9H611 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PIF1Q9H611 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PIF1Q9H611 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PIF1Q9H611 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
PIF1Q9H611 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.62■□□□□ 0.41
PIF1Q9H611 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.62■□□□□ 0.41
PIF1Q9H611 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PIF1Q9H611 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PIF1Q9H611 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.62■□□□□ 0.41
PIF1Q9H611 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PIF1Q9H611 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.62■□□□□ 0.41
PIF1Q9H611 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.62■□□□□ 0.41
PIF1Q9H611 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.62■□□□□ 0.41
PIF1Q9H611 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.62■□□□□ 0.41
PIF1Q9H611 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.62■□□□□ 0.41
PIF1Q9H611 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PIF1Q9H611 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.62■□□□□ 0.41
PIF1Q9H611 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.62■□□□□ 0.41
PIF1Q9H611 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms