Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 AL353692.3-201ENST00000407031 1396 ntBASIC19.88■□□□□ 0.77
NXF3Q9H4D5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 AP000867.3-201ENST00000524675 377 ntBASIC19.88■□□□□ 0.77
NXF3Q9H4D5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 AL592071.1-201ENST00000611956 408 ntBASIC19.88■□□□□ 0.77
NXF3Q9H4D5 IGHV3-41-201ENST00000613121 348 ntBASIC19.88■□□□□ 0.77
NXF3Q9H4D5 AC004263.2-201ENST00000617183 678 ntBASIC19.88■□□□□ 0.77
NXF3Q9H4D5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NXF3Q9H4D5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NXF3Q9H4D5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NXF3Q9H4D5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NXF3Q9H4D5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NXF3Q9H4D5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NXF3Q9H4D5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.87■□□□□ 0.77
NXF3Q9H4D5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.87■□□□□ 0.77
NXF3Q9H4D5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.87■□□□□ 0.77
NXF3Q9H4D5 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.87■□□□□ 0.77
NXF3Q9H4D5 AL024508.2-201ENST00000607749 1894 ntBASIC19.87■□□□□ 0.77
NXF3Q9H4D5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NXF3Q9H4D5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.87■□□□□ 0.77
NXF3Q9H4D5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NXF3Q9H4D5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NXF3Q9H4D5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.87■□□□□ 0.77
NXF3Q9H4D5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 AC120498.9-201ENST00000339021 3867 ntBASIC19.86■□□□□ 0.77
NXF3Q9H4D5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NXF3Q9H4D5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 RN7SL606P-201ENST00000472779 293 ntBASIC19.85■□□□□ 0.77
NXF3Q9H4D5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NXF3Q9H4D5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
NXF3Q9H4D5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms