Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 AC008556.1-201ENST00000610908 2040 ntBASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 AC008622.2-201ENST00000617006 1229 ntBASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 AL499627.1-201ENST00000569373 2188 ntBASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC68Q9H2F9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 KRT8P45-201ENST00000414328 1447 ntBASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 AL023284.2-201ENST00000405850 579 ntBASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 RBM17P1-201ENST00000453646 1190 ntBASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC68Q9H2F9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 SNORA78-201ENST00000459373 127 ntBASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 GPAT2P1-201ENST00000444924 1672 ntBASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC68Q9H2F9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms