Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.26□□□□□ -0.13
NDUFAF3Q9BU61 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
NDUFAF3Q9BU61 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
NDUFAF3Q9BU61 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFAF3Q9BU61 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFAF3Q9BU61 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFAF3Q9BU61 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFAF3Q9BU61 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFAF3Q9BU61 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFAF3Q9BU61 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFAF3Q9BU61 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NDUFAF3Q9BU61 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 CROCCP2-202ENST00000412962 2773 ntBASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 SOX15-203ENST00000570788 1093 ntBASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFAF3Q9BU61 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 PHGDH-210ENST00000641115 1638 ntBASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 AC098590.1-201ENST00000468126 897 ntBASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 RPS2P52-201ENST00000469610 820 ntBASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 FAM197Y4-202ENST00000622692 608 ntBASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 AL031598.1-201ENST00000561511 1773 ntBASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFAF3Q9BU61 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms