Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.64■□□□□ 0.74
PAAF1Q9BRP4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.64■□□□□ 0.73
PAAF1Q9BRP4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.64■□□□□ 0.73
PAAF1Q9BRP4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
PAAF1Q9BRP4 AC111152.3-201ENST00000569699 673 ntBASIC19.64■□□□□ 0.73
PAAF1Q9BRP4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.64■□□□□ 0.73
PAAF1Q9BRP4 AC138894.3-201ENST00000603787 634 ntBASIC19.64■□□□□ 0.73
PAAF1Q9BRP4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PAAF1Q9BRP4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PAAF1Q9BRP4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.64■□□□□ 0.73
PAAF1Q9BRP4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PAAF1Q9BRP4 AL024508.2-201ENST00000607749 1894 ntBASIC19.64■□□□□ 0.73
PAAF1Q9BRP4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PAAF1Q9BRP4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PAAF1Q9BRP4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 AC104819.1-201ENST00000504587 486 ntBASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 GUSBP12-201ENST00000513727 720 ntBASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAAF1Q9BRP4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 AC112777.1-201ENST00000540175 1423 ntBASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 IGHV3-47-201ENST00000425060 335 ntBASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 KRT17P6-201ENST00000453795 1220 ntBASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 EMBP1-201ENST00000458200 901 ntBASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAAF1Q9BRP4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 KRT18P31-201ENST00000506277 1292 ntBASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 AC099336.1-202ENST00000602961 463 ntBASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 ANO7L1-203ENST00000602586 1720 ntBASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms