Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDCA3Q99618 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.15■□□□□ 0.66
CDCA3Q99618 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDCA3Q99618 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDCA3Q99618 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDCA3Q99618 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.14■□□□□ 0.66
CDCA3Q99618 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.14■□□□□ 0.65
CDCA3Q99618 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA3Q99618 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA3Q99618 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.14■□□□□ 0.65
CDCA3Q99618 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA3Q99618 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.14■□□□□ 0.65
CDCA3Q99618 RPS2P1-201ENST00000434010 821 ntBASIC19.14■□□□□ 0.65
CDCA3Q99618 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.14■□□□□ 0.65
CDCA3Q99618 SART3-203ENST00000546611 1184 ntBASIC19.14■□□□□ 0.65
CDCA3Q99618 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA3Q99618 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.14■□□□□ 0.65
CDCA3Q99618 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.14■□□□□ 0.65
CDCA3Q99618 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA3Q99618 AL139288.1-201ENST00000623748 933 ntBASIC19.14■□□□□ 0.65
CDCA3Q99618 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.14■□□□□ 0.65
CDCA3Q99618 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA3Q99618 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA3Q99618 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA3Q99618 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.14■□□□□ 0.65
CDCA3Q99618 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.14■□□□□ 0.65
CDCA3Q99618 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CDCA3Q99618 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CDCA3Q99618 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA3Q99618 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA3Q99618 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA3Q99618 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.13■□□□□ 0.65
CDCA3Q99618 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.13■□□□□ 0.65
CDCA3Q99618 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.13■□□□□ 0.65
CDCA3Q99618 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.13■□□□□ 0.65
CDCA3Q99618 AC098831.1-202ENST00000438821 336 ntBASIC19.13■□□□□ 0.65
CDCA3Q99618 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.13■□□□□ 0.65
CDCA3Q99618 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.13■□□□□ 0.65
CDCA3Q99618 AC034105.1-201ENST00000563488 319 ntBASIC19.13■□□□□ 0.65
CDCA3Q99618 Z83851.2-201ENST00000609564 659 ntBASIC19.13■□□□□ 0.65
CDCA3Q99618 AC083906.6-201ENST00000641366 219 ntBASIC19.13■□□□□ 0.65
CDCA3Q99618 AC079781.4-201ENST00000641908 219 ntBASIC19.13■□□□□ 0.65
CDCA3Q99618 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA3Q99618 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA3Q99618 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CDCA3Q99618 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA3Q99618 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA3Q99618 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA3Q99618 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.13■□□□□ 0.65
CDCA3Q99618 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA3Q99618 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA3Q99618 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDCA3Q99618 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CDCA3Q99618 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.12■□□□□ 0.65
CDCA3Q99618 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDCA3Q99618 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.12■□□□□ 0.65
CDCA3Q99618 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CDCA3Q99618 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.12■□□□□ 0.65
CDCA3Q99618 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.12■□□□□ 0.65
CDCA3Q99618 DNAJB3-201ENST00000446806 729 ntBASIC19.12■□□□□ 0.65
CDCA3Q99618 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.12■□□□□ 0.65
CDCA3Q99618 MIR3687-2-201ENST00000577708 61 ntBASIC19.12■□□□□ 0.65
CDCA3Q99618 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.12■□□□□ 0.65
CDCA3Q99618 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.12■□□□□ 0.65
CDCA3Q99618 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDCA3Q99618 MIR3687-1-201ENST00000614492 61 ntBASIC19.12■□□□□ 0.65
CDCA3Q99618 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDCA3Q99618 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDCA3Q99618 CLDN5-201ENST00000403084 2357 ntBASIC19.12■□□□□ 0.65
CDCA3Q99618 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.12■□□□□ 0.65
CDCA3Q99618 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.11■□□□□ 0.65
CDCA3Q99618 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA3Q99618 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA3Q99618 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CDCA3Q99618 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CDCA3Q99618 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA3Q99618 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA3Q99618 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA3Q99618 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA3Q99618 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.11■□□□□ 0.65
CDCA3Q99618 KRT18P3-201ENST00000451602 1288 ntBASIC19.11■□□□□ 0.65
CDCA3Q99618 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
CDCA3Q99618 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.11■□□□□ 0.65
CDCA3Q99618 AC092910.1-201ENST00000482027 1129 ntBASIC19.11■□□□□ 0.65
CDCA3Q99618 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.11■□□□□ 0.65
CDCA3Q99618 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.11■□□□□ 0.65
CDCA3Q99618 AC040169.1-201ENST00000565382 521 ntBASIC19.11■□□□□ 0.65
CDCA3Q99618 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.11■□□□□ 0.65
CDCA3Q99618 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CDCA3Q99618 AC055717.3-201ENST00000622967 595 ntBASIC19.11■□□□□ 0.65
CDCA3Q99618 AC008735.5-201ENST00000623544 497 ntBASIC19.11■□□□□ 0.65
CDCA3Q99618 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
CDCA3Q99618 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CDCA3Q99618 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA3Q99618 AIRN-201ENST00000601203 4374 ntBASIC19.11■□□□□ 0.65
CDCA3Q99618 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA3Q99618 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA3Q99618 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA3Q99618 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA3Q99618 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms