Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SCAF11Q99590 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF11Q99590 PAN3-AS1-201ENST00000563843 1351 ntBASIC26.41■■□□□ 1.82
SCAF11Q99590 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC26.41■■□□□ 1.82
SCAF11Q99590 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF11Q99590 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF11Q99590 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC26.41■■□□□ 1.82
SCAF11Q99590 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC26.41■■□□□ 1.82
SCAF11Q99590 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC26.41■■□□□ 1.82
SCAF11Q99590 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF11Q99590 DDT-203ENST00000403754 569 ntTSL 3 BASIC26.41■■□□□ 1.82
SCAF11Q99590 DDT-206ENST00000430101 573 ntTSL 2 BASIC26.41■■□□□ 1.82
SCAF11Q99590 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC26.41■■□□□ 1.82
SCAF11Q99590 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC26.41■■□□□ 1.82
SCAF11Q99590 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
SCAF11Q99590 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF11Q99590 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF11Q99590 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SCAF11Q99590 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SCAF11Q99590 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
SCAF11Q99590 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SCAF11Q99590 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
SCAF11Q99590 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SCAF11Q99590 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SCAF11Q99590 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SCAF11Q99590 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC26.4■■□□□ 1.82
SCAF11Q99590 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
SCAF11Q99590 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC26.4■■□□□ 1.82
SCAF11Q99590 HNRNPA1P28-201ENST00000424481 961 ntBASIC26.4■■□□□ 1.82
SCAF11Q99590 AL591424.1-201ENST00000442569 1213 ntBASIC26.4■■□□□ 1.82
SCAF11Q99590 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC26.4■■□□□ 1.82
SCAF11Q99590 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SCAF11Q99590 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SCAF11Q99590 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
SCAF11Q99590 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SCAF11Q99590 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.82
SCAF11Q99590 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
SCAF11Q99590 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SCAF11Q99590 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SCAF11Q99590 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC26.39■■□□□ 1.82
SCAF11Q99590 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SCAF11Q99590 GZMM-202ENST00000592501 941 ntTSL 3 BASIC26.39■■□□□ 1.82
SCAF11Q99590 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC26.39■■□□□ 1.82
SCAF11Q99590 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC26.39■■□□□ 1.82
SCAF11Q99590 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SCAF11Q99590 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC26.39■■□□□ 1.82
SCAF11Q99590 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
SCAF11Q99590 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC26.39■■□□□ 1.82
SCAF11Q99590 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
SCAF11Q99590 AC007952.6-201ENST00000573168 2673 ntBASIC26.39■■□□□ 1.81
SCAF11Q99590 AC003957.1-201ENST00000625108 2673 ntBASIC26.39■■□□□ 1.81
SCAF11Q99590 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
SCAF11Q99590 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC26.39■■□□□ 1.81
SCAF11Q99590 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SCAF11Q99590 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SCAF11Q99590 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC26.39■■□□□ 1.81
SCAF11Q99590 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF11Q99590 YBX2P1-201ENST00000394192 760 ntBASIC26.38■■□□□ 1.81
SCAF11Q99590 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF11Q99590 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC26.38■■□□□ 1.81
SCAF11Q99590 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
SCAF11Q99590 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF11Q99590 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
SCAF11Q99590 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF11Q99590 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF11Q99590 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF11Q99590 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF11Q99590 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF11Q99590 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC26.38■■□□□ 1.81
SCAF11Q99590 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCAF11Q99590 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC26.37■■□□□ 1.81
SCAF11Q99590 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCAF11Q99590 RCN1P2-201ENST00000398357 915 ntBASIC26.37■■□□□ 1.81
SCAF11Q99590 AC004967.1-201ENST00000453589 447 ntBASIC26.37■■□□□ 1.81
SCAF11Q99590 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC26.37■■□□□ 1.81
SCAF11Q99590 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC26.37■■□□□ 1.81
SCAF11Q99590 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC26.37■■□□□ 1.81
SCAF11Q99590 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC26.37■■□□□ 1.81
SCAF11Q99590 MTDHP3-201ENST00000594186 672 ntBASIC26.37■■□□□ 1.81
SCAF11Q99590 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC26.37■■□□□ 1.81
SCAF11Q99590 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SCAF11Q99590 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCAF11Q99590 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.81
SCAF11Q99590 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.37■■□□□ 1.81
SCAF11Q99590 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC26.37■■□□□ 1.81
SCAF11Q99590 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC26.37■■□□□ 1.81
SCAF11Q99590 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCAF11Q99590 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCAF11Q99590 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SCAF11Q99590 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
SCAF11Q99590 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SCAF11Q99590 FIS1-203ENST00000442303 631 ntTSL 3 BASIC26.36■■□□□ 1.81
SCAF11Q99590 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC26.36■■□□□ 1.81
SCAF11Q99590 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC26.36■■□□□ 1.81
SCAF11Q99590 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
SCAF11Q99590 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC26.36■■□□□ 1.81
SCAF11Q99590 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC26.36■■□□□ 1.81
SCAF11Q99590 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
SCAF11Q99590 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
SCAF11Q99590 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms