Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDK5RAP2Q96SN8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.64■■□□□ 1.06
CDK5RAP2Q96SN8 KRT16P4-201ENST00000453883 522 ntBASIC21.64■■□□□ 1.06
CDK5RAP2Q96SN8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.64■■□□□ 1.06
CDK5RAP2Q96SN8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDK5RAP2Q96SN8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDK5RAP2Q96SN8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDK5RAP2Q96SN8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDK5RAP2Q96SN8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CDK5RAP2Q96SN8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP2Q96SN8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP2Q96SN8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP2Q96SN8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP2Q96SN8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP2Q96SN8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP2Q96SN8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP2Q96SN8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP2Q96SN8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP2Q96SN8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CDK5RAP2Q96SN8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.64■■□□□ 1.05
CDK5RAP2Q96SN8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
CDK5RAP2Q96SN8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.64■■□□□ 1.05
CDK5RAP2Q96SN8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP2Q96SN8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP2Q96SN8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.64■■□□□ 1.05
CDK5RAP2Q96SN8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.63■■□□□ 1.05
CDK5RAP2Q96SN8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDK5RAP2Q96SN8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.63■■□□□ 1.05
CDK5RAP2Q96SN8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.63■■□□□ 1.05
CDK5RAP2Q96SN8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
CDK5RAP2Q96SN8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.63■■□□□ 1.05
CDK5RAP2Q96SN8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDK5RAP2Q96SN8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDK5RAP2Q96SN8 AC104692.2-201ENST00000603054 253 ntBASIC21.63■■□□□ 1.05
CDK5RAP2Q96SN8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.63■■□□□ 1.05
CDK5RAP2Q96SN8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDK5RAP2Q96SN8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CDK5RAP2Q96SN8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.63■■□□□ 1.05
CDK5RAP2Q96SN8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDK5RAP2Q96SN8 KRT8P47-201ENST00000604727 1398 ntBASIC21.63■■□□□ 1.05
CDK5RAP2Q96SN8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDK5RAP2Q96SN8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDK5RAP2Q96SN8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 SAPCD2P3-201ENST00000455031 850 ntBASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 NUS1P1-201ENST00000446295 882 ntBASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
CDK5RAP2Q96SN8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.61■■□□□ 1.05
CDK5RAP2Q96SN8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.61■■□□□ 1.05
CDK5RAP2Q96SN8 AC096582.2-201ENST00000510860 516 ntBASIC21.61■■□□□ 1.05
CDK5RAP2Q96SN8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDK5RAP2Q96SN8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.61■■□□□ 1.05
CDK5RAP2Q96SN8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDK5RAP2Q96SN8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.61■■□□□ 1.05
CDK5RAP2Q96SN8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.61■■□□□ 1.05
CDK5RAP2Q96SN8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.61■■□□□ 1.05
CDK5RAP2Q96SN8 AC093010.1-201ENST00000473625 1624 ntBASIC21.61■■□□□ 1.05
CDK5RAP2Q96SN8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.61■■□□□ 1.05
CDK5RAP2Q96SN8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDK5RAP2Q96SN8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDK5RAP2Q96SN8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDK5RAP2Q96SN8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDK5RAP2Q96SN8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 MRPL3P1-201ENST00000400109 1033 ntBASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 AL671883.3-201ENST00000603274 991 ntBASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 AC026396.1-201ENST00000419388 421 ntBASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.6■■□□□ 1.05
CDK5RAP2Q96SN8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms