Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
IFT140Q96RY7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC30.45■■■□□ 2.47
IFT140Q96RY7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC30.45■■■□□ 2.47
IFT140Q96RY7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC30.45■■■□□ 2.47
IFT140Q96RY7 AC006557.2-201ENST00000592985 1240 ntBASIC30.45■■■□□ 2.47
IFT140Q96RY7 AC073592.4-201ENST00000623827 446 ntBASIC30.45■■■□□ 2.47
IFT140Q96RY7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC30.45■■■□□ 2.47
IFT140Q96RY7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
IFT140Q96RY7 AC079776.2-201ENST00000641154 1609 ntBASIC30.45■■■□□ 2.47
IFT140Q96RY7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC30.45■■■□□ 2.47
IFT140Q96RY7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
IFT140Q96RY7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC30.45■■■□□ 2.47
IFT140Q96RY7 MTMR9LP-203ENST00000426597 1545 ntBASIC30.45■■■□□ 2.46
IFT140Q96RY7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
IFT140Q96RY7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
IFT140Q96RY7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
IFT140Q96RY7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
IFT140Q96RY7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC30.44■■■□□ 2.46
IFT140Q96RY7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
IFT140Q96RY7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
IFT140Q96RY7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
IFT140Q96RY7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
IFT140Q96RY7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
IFT140Q96RY7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
IFT140Q96RY7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC30.44■■■□□ 2.46
IFT140Q96RY7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC30.44■■■□□ 2.46
IFT140Q96RY7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC30.44■■■□□ 2.46
IFT140Q96RY7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
IFT140Q96RY7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
IFT140Q96RY7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
IFT140Q96RY7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC30.44■■■□□ 2.46
IFT140Q96RY7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
IFT140Q96RY7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
IFT140Q96RY7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC30.43■■■□□ 2.46
IFT140Q96RY7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
IFT140Q96RY7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC30.43■■■□□ 2.46
IFT140Q96RY7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC30.43■■■□□ 2.46
IFT140Q96RY7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC30.43■■■□□ 2.46
IFT140Q96RY7 ELL2P1-201ENST00000413990 1906 ntBASIC30.43■■■□□ 2.46
IFT140Q96RY7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
IFT140Q96RY7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
IFT140Q96RY7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
IFT140Q96RY7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
IFT140Q96RY7 AC092865.6-201ENST00000642101 219 ntBASIC30.43■■■□□ 2.46
IFT140Q96RY7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
IFT140Q96RY7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
IFT140Q96RY7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
IFT140Q96RY7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
IFT140Q96RY7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
IFT140Q96RY7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
IFT140Q96RY7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
IFT140Q96RY7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC30.42■■■□□ 2.46
IFT140Q96RY7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
IFT140Q96RY7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC30.42■■■□□ 2.46
IFT140Q96RY7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC30.42■■■□□ 2.46
IFT140Q96RY7 AL096865.1-201ENST00000606796 927 ntBASIC30.42■■■□□ 2.46
IFT140Q96RY7 AL024508.2-201ENST00000607749 1894 ntBASIC30.42■■■□□ 2.46
IFT140Q96RY7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
IFT140Q96RY7 AC005593.1-201ENST00000624894 515 ntBASIC30.42■■■□□ 2.46
IFT140Q96RY7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
IFT140Q96RY7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
IFT140Q96RY7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
IFT140Q96RY7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC30.41■■■□□ 2.46
IFT140Q96RY7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC30.41■■■□□ 2.46
IFT140Q96RY7 AC136632.2-201ENST00000512891 861 ntBASIC30.41■■■□□ 2.46
IFT140Q96RY7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
IFT140Q96RY7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC30.41■■■□□ 2.46
IFT140Q96RY7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
IFT140Q96RY7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC30.41■■■□□ 2.46
IFT140Q96RY7 HEIH-201ENST00000623091 1652 ntBASIC30.41■■■□□ 2.46
IFT140Q96RY7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC30.4■■■□□ 2.46
IFT140Q96RY7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC30.4■■■□□ 2.46
IFT140Q96RY7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
IFT140Q96RY7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC30.4■■■□□ 2.46
IFT140Q96RY7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
IFT140Q96RY7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC30.4■■■□□ 2.46
IFT140Q96RY7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
IFT140Q96RY7 AL078644.1-201ENST00000609881 752 ntBASIC30.4■■■□□ 2.46
IFT140Q96RY7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
IFT140Q96RY7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
IFT140Q96RY7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC30.4■■■□□ 2.46
IFT140Q96RY7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
IFT140Q96RY7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC30.39■■■□□ 2.46
IFT140Q96RY7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC30.39■■■□□ 2.46
IFT140Q96RY7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC30.39■■■□□ 2.46
IFT140Q96RY7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC30.39■■■□□ 2.46
IFT140Q96RY7 AL022326.1-202ENST00000641533 845 ntBASIC30.39■■■□□ 2.46
IFT140Q96RY7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
IFT140Q96RY7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC30.39■■■□□ 2.45
IFT140Q96RY7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC30.38■■■□□ 2.45
IFT140Q96RY7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
IFT140Q96RY7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC30.38■■■□□ 2.45
IFT140Q96RY7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
IFT140Q96RY7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC30.38■■■□□ 2.45
IFT140Q96RY7 BX005266.1-201ENST00000473402 457 ntBASIC30.38■■■□□ 2.45
IFT140Q96RY7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC30.38■■■□□ 2.45
IFT140Q96RY7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
IFT140Q96RY7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC30.38■■■□□ 2.45
IFT140Q96RY7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC30.38■■■□□ 2.45
IFT140Q96RY7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms