Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 AC005225.4-201ENST00000557330 545 ntBASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 AC093512.1-201ENST00000617969 520 ntBASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 AC114341.1-201ENST00000618070 349 ntBASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNTNAP3BQ96NU0 GPAT2P1-201ENST00000444924 1672 ntBASIC17.58■□□□□ 0.41
CNTNAP3BQ96NU0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNTNAP3BQ96NU0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.58■□□□□ 0.4
CNTNAP3BQ96NU0 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNTNAP3BQ96NU0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CNTNAP3BQ96NU0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CNTNAP3BQ96NU0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CNTNAP3BQ96NU0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.58■□□□□ 0.4
CNTNAP3BQ96NU0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.58■□□□□ 0.4
CNTNAP3BQ96NU0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNTNAP3BQ96NU0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.58■□□□□ 0.4
CNTNAP3BQ96NU0 ALG1L5P-201ENST00000482043 771 ntBASIC17.58■□□□□ 0.4
CNTNAP3BQ96NU0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.58■□□□□ 0.4
CNTNAP3BQ96NU0 UNC93B6-202ENST00000528242 690 ntBASIC17.58■□□□□ 0.4
CNTNAP3BQ96NU0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.58■□□□□ 0.4
CNTNAP3BQ96NU0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNTNAP3BQ96NU0 AC021087.4-201ENST00000563761 564 ntBASIC17.58■□□□□ 0.4
CNTNAP3BQ96NU0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.58■□□□□ 0.4
CNTNAP3BQ96NU0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.58■□□□□ 0.4
CNTNAP3BQ96NU0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CNTNAP3BQ96NU0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 RBM17P3-201ENST00000417687 1192 ntBASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 MCCD1P2-201ENST00000423228 335 ntBASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 AC069262.1-201ENST00000539058 672 ntBASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNTNAP3BQ96NU0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.56■□□□□ 0.4
CNTNAP3BQ96NU0 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms