Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHFRQ96EP1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHFRQ96EP1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHFRQ96EP1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHFRQ96EP1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHFRQ96EP1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHFRQ96EP1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHFRQ96EP1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CHFRQ96EP1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.75■□□□□ 0.59
CHFRQ96EP1 SAPCD2P3-201ENST00000455031 850 ntBASIC18.75■□□□□ 0.59
CHFRQ96EP1 VENTXP7-201ENST00000475503 772 ntBASIC18.75■□□□□ 0.59
CHFRQ96EP1 AL662844.1-201ENST00000546340 181 ntBASIC18.75■□□□□ 0.59
CHFRQ96EP1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.75■□□□□ 0.59
CHFRQ96EP1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHFRQ96EP1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.75■□□□□ 0.59
CHFRQ96EP1 AC023511.2-201ENST00000618803 211 ntBASIC18.75■□□□□ 0.59
CHFRQ96EP1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHFRQ96EP1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHFRQ96EP1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHFRQ96EP1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHFRQ96EP1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHFRQ96EP1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
CHFRQ96EP1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHFRQ96EP1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.74■□□□□ 0.59
CHFRQ96EP1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHFRQ96EP1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHFRQ96EP1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHFRQ96EP1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.74■□□□□ 0.59
CHFRQ96EP1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHFRQ96EP1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHFRQ96EP1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.74■□□□□ 0.59
CHFRQ96EP1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHFRQ96EP1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHFRQ96EP1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHFRQ96EP1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHFRQ96EP1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.74■□□□□ 0.59
CHFRQ96EP1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.74■□□□□ 0.59
CHFRQ96EP1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CHFRQ96EP1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHFRQ96EP1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHFRQ96EP1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHFRQ96EP1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.74■□□□□ 0.59
CHFRQ96EP1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.74■□□□□ 0.59
CHFRQ96EP1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHFRQ96EP1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHFRQ96EP1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHFRQ96EP1 AL161938.1-201ENST00000569833 2180 ntBASIC18.74■□□□□ 0.59
CHFRQ96EP1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHFRQ96EP1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHFRQ96EP1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHFRQ96EP1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHFRQ96EP1 AIRN-201ENST00000601203 4374 ntBASIC18.73■□□□□ 0.59
CHFRQ96EP1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CHFRQ96EP1 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.73■□□□□ 0.59
CHFRQ96EP1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHFRQ96EP1 MINOS1P3-201ENST00000457048 203 ntBASIC18.73■□□□□ 0.59
CHFRQ96EP1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CHFRQ96EP1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CHFRQ96EP1 AC011840.4-201ENST00000578471 627 ntBASIC18.73■□□□□ 0.59
CHFRQ96EP1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHFRQ96EP1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHFRQ96EP1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHFRQ96EP1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
CHFRQ96EP1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CHFRQ96EP1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CHFRQ96EP1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CHFRQ96EP1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.73■□□□□ 0.59
CHFRQ96EP1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.73■□□□□ 0.59
CHFRQ96EP1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CHFRQ96EP1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHFRQ96EP1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHFRQ96EP1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CHFRQ96EP1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHFRQ96EP1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHFRQ96EP1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHFRQ96EP1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHFRQ96EP1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.72■□□□□ 0.59
CHFRQ96EP1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.72■□□□□ 0.59
CHFRQ96EP1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHFRQ96EP1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.72■□□□□ 0.59
CHFRQ96EP1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHFRQ96EP1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHFRQ96EP1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.72■□□□□ 0.59
CHFRQ96EP1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.72■□□□□ 0.59
CHFRQ96EP1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.72■□□□□ 0.59
CHFRQ96EP1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.72■□□□□ 0.59
CHFRQ96EP1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHFRQ96EP1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CHFRQ96EP1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
CHFRQ96EP1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.72■□□□□ 0.59
CHFRQ96EP1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.72■□□□□ 0.59
CHFRQ96EP1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.72■□□□□ 0.59
CHFRQ96EP1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.72■□□□□ 0.59
CHFRQ96EP1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.71■□□□□ 0.59
CHFRQ96EP1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHFRQ96EP1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.71■□□□□ 0.59
CHFRQ96EP1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHFRQ96EP1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHFRQ96EP1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHFRQ96EP1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms