Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 AL031133.1-201ENST00000406807 723 ntBASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3KBP1Q96B97 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.27■□□□□ 0.51
SH3KBP1Q96B97 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SH3KBP1Q96B97 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SH3KBP1Q96B97 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SH3KBP1Q96B97 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.27■□□□□ 0.51
SH3KBP1Q96B97 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SH3KBP1Q96B97 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 AC026471.1-201ENST00000564629 3026 ntBASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 AC006333.2-201ENST00000607957 2099 ntBASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 CROCCP3-202ENST00000420820 1947 ntBASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 STARP1-201ENST00000397973 869 ntBASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 AL359075.1-203ENST00000462729 1002 ntBASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 AC034232.1-201ENST00000506026 1064 ntBASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 AL121956.5-201ENST00000625261 221 ntBASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SH3KBP1Q96B97 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 AL671277.2-201ENST00000458060 996 ntBASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 GCSHP2-201ENST00000560971 527 ntBASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.25■□□□□ 0.51
SH3KBP1Q96B97 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms