Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 UPF3AP3-201ENST00000420996 769 ntBASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 AC098831.1-202ENST00000438821 336 ntBASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 AC132008.2-207ENST00000454517 770 ntBASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 AC027601.4-201ENST00000611259 610 ntBASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 AC055717.3-201ENST00000622967 595 ntBASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 AC116407.3-201ENST00000623905 1129 ntBASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 AC073314.1-201ENST00000568729 2216 ntBASIC17.35■□□□□ 0.37
SNIP1Q8TAD8 AL391422.3-201ENST00000603791 2761 ntBASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 RBM17P3-201ENST00000417687 1192 ntBASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 AP001160.2-201ENST00000596071 487 ntBASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 AC034236.2-201ENST00000606662 1610 ntBASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 AC022898.2-201ENST00000616822 1312 ntBASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 FAM197Y3-203ENST00000618346 717 ntBASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 AC090340.1-201ENST00000620778 4980 ntBASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNIP1Q8TAD8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
SNIP1Q8TAD8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SNIP1Q8TAD8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SNIP1Q8TAD8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SNIP1Q8TAD8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SNIP1Q8TAD8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNIP1Q8TAD8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SNIP1Q8TAD8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNIP1Q8TAD8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SNIP1Q8TAD8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNIP1Q8TAD8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNIP1Q8TAD8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SNIP1Q8TAD8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms