Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.41■■□□□ 1.18
SLX4Q8IY92 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLX4Q8IY92 IMP4-203ENST00000409935 958 ntTSL 5 BASIC22.41■■□□□ 1.18
SLX4Q8IY92 DANCR-204ENST00000444958 709 ntTSL 3 BASIC22.41■■□□□ 1.18
SLX4Q8IY92 KRT18P3-201ENST00000451602 1288 ntBASIC22.41■■□□□ 1.18
SLX4Q8IY92 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC22.41■■□□□ 1.18
SLX4Q8IY92 AL139288.1-201ENST00000623748 933 ntBASIC22.41■■□□□ 1.18
SLX4Q8IY92 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLX4Q8IY92 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.41■■□□□ 1.18
SLX4Q8IY92 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
SLX4Q8IY92 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.41■■□□□ 1.18
SLX4Q8IY92 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.41■■□□□ 1.18
SLX4Q8IY92 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLX4Q8IY92 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLX4Q8IY92 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLX4Q8IY92 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLX4Q8IY92 RPS2P28-201ENST00000314255 741 ntBASIC22.41■■□□□ 1.18
SLX4Q8IY92 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC22.41■■□□□ 1.18
SLX4Q8IY92 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.41■■□□□ 1.18
SLX4Q8IY92 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC22.4■■□□□ 1.18
SLX4Q8IY92 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC22.4■■□□□ 1.18
SLX4Q8IY92 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.4■■□□□ 1.18
SLX4Q8IY92 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.4■■□□□ 1.18
SLX4Q8IY92 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SLX4Q8IY92 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.4■■□□□ 1.18
SLX4Q8IY92 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLX4Q8IY92 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
SLX4Q8IY92 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.4■■□□□ 1.18
SLX4Q8IY92 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC22.4■■□□□ 1.18
SLX4Q8IY92 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SLX4Q8IY92 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLX4Q8IY92 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLX4Q8IY92 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC22.4■■□□□ 1.18
SLX4Q8IY92 DNAJB3-202ENST00000449667 1266 ntBASIC22.4■■□□□ 1.18
SLX4Q8IY92 HS6ST1P1-201ENST00000481504 1234 ntBASIC22.4■■□□□ 1.18
SLX4Q8IY92 AC040169.1-201ENST00000565382 521 ntBASIC22.4■■□□□ 1.18
SLX4Q8IY92 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLX4Q8IY92 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
SLX4Q8IY92 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.39■■□□□ 1.18
SLX4Q8IY92 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.39■■□□□ 1.18
SLX4Q8IY92 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SLX4Q8IY92 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SLX4Q8IY92 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SLX4Q8IY92 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
SLX4Q8IY92 AL356309.3-201ENST00000624132 1934 ntBASIC22.39■■□□□ 1.18
SLX4Q8IY92 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SLX4Q8IY92 AC004967.1-201ENST00000453589 447 ntBASIC22.39■■□□□ 1.17
SLX4Q8IY92 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC22.39■■□□□ 1.17
SLX4Q8IY92 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC22.39■■□□□ 1.17
SLX4Q8IY92 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC22.39■■□□□ 1.17
SLX4Q8IY92 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC22.39■■□□□ 1.17
SLX4Q8IY92 LINC02084-201ENST00000606069 1096 ntBASIC22.39■■□□□ 1.17
SLX4Q8IY92 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SLX4Q8IY92 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
SLX4Q8IY92 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SLX4Q8IY92 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SLX4Q8IY92 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SLX4Q8IY92 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.39■■□□□ 1.17
SLX4Q8IY92 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SLX4Q8IY92 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SLX4Q8IY92 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
SLX4Q8IY92 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.38■■□□□ 1.17
SLX4Q8IY92 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SLX4Q8IY92 AC125634.1-201ENST00000438758 1403 ntBASIC22.38■■□□□ 1.17
SLX4Q8IY92 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLX4Q8IY92 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC22.38■■□□□ 1.17
SLX4Q8IY92 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SLX4Q8IY92 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SLX4Q8IY92 AC112482.1-201ENST00000492080 688 ntBASIC22.38■■□□□ 1.17
SLX4Q8IY92 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC22.38■■□□□ 1.17
SLX4Q8IY92 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC22.38■■□□□ 1.17
SLX4Q8IY92 COX5A-204ENST00000567270 579 ntTSL 3 BASIC22.38■■□□□ 1.17
SLX4Q8IY92 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
SLX4Q8IY92 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SLX4Q8IY92 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC22.38■■□□□ 1.17
SLX4Q8IY92 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLX4Q8IY92 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLX4Q8IY92 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLX4Q8IY92 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLX4Q8IY92 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SLX4Q8IY92 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC22.38■■□□□ 1.17
SLX4Q8IY92 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SLX4Q8IY92 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLX4Q8IY92 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
SLX4Q8IY92 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLX4Q8IY92 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLX4Q8IY92 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
SLX4Q8IY92 HNRNPA1P28-201ENST00000424481 961 ntBASIC22.38■■□□□ 1.17
SLX4Q8IY92 MTDHP4-201ENST00000600287 670 ntBASIC22.38■■□□□ 1.17
SLX4Q8IY92 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
SLX4Q8IY92 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SLX4Q8IY92 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.38■■□□□ 1.17
SLX4Q8IY92 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLX4Q8IY92 AP002414.3-201ENST00000589352 1468 ntBASIC22.37■■□□□ 1.17
SLX4Q8IY92 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.37■■□□□ 1.17
SLX4Q8IY92 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.37■■□□□ 1.17
SLX4Q8IY92 MTCL1P1-201ENST00000446207 792 ntBASIC22.37■■□□□ 1.17
SLX4Q8IY92 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SLX4Q8IY92 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC22.37■■□□□ 1.17
SLX4Q8IY92 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms