Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC25Q86WR0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC25Q86WR0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC25Q86WR0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CCDC25Q86WR0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC25Q86WR0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC25Q86WR0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CCDC25Q86WR0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CCDC25Q86WR0 KRT8P11-201ENST00000409686 1436 ntBASIC19.08■□□□□ 0.64
CCDC25Q86WR0 AC112777.1-201ENST00000540175 1423 ntBASIC19.08■□□□□ 0.64
CCDC25Q86WR0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC25Q86WR0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC25Q86WR0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 POU5F1P3-201ENST00000428824 1078 ntBASIC19.07■□□□□ 0.64
CCDC25Q86WR0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 Z85996.1-201ENST00000494644 937 ntBASIC19.07■□□□□ 0.64
CCDC25Q86WR0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.07■□□□□ 0.64
CCDC25Q86WR0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC25Q86WR0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 AC133041.1-202ENST00000642053 222 ntBASIC19.06■□□□□ 0.64
CCDC25Q86WR0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 AC138028.4-201ENST00000564984 1845 ntBASIC19.06■□□□□ 0.64
CCDC25Q86WR0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC25Q86WR0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 AC139713.2-201ENST00000641328 2723 ntBASIC19.05■□□□□ 0.64
CCDC25Q86WR0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 AC069152.1-201ENST00000438030 544 ntBASIC19.05■□□□□ 0.64
CCDC25Q86WR0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC25Q86WR0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms