Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRTM4Q86VH4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LRRTM4Q86VH4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRTM4Q86VH4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 MIR662-201ENST00000384847 95 ntBASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 AC116407.4-201ENST00000623319 1061 ntBASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRTM4Q86VH4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 SDHAP2-201ENST00000455183 2001 ntBASIC18.05■□□□□ 0.48
LRRTM4Q86VH4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.04■□□□□ 0.48
LRRTM4Q86VH4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.04■□□□□ 0.48
LRRTM4Q86VH4 AL162741.1-201ENST00000565563 1558 ntBASIC18.04■□□□□ 0.48
LRRTM4Q86VH4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRTM4Q86VH4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRTM4Q86VH4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRTM4Q86VH4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LRRTM4Q86VH4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRTM4Q86VH4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRTM4Q86VH4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRTM4Q86VH4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LRRTM4Q86VH4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRTM4Q86VH4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRTM4Q86VH4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms