Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13BQ7Z7G8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 AC145285.3-201ENST00000564603 959 ntBASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 AL499627.1-201ENST00000569373 2188 ntBASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 YBX2P1-201ENST00000394192 760 ntBASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 RN7SL606P-201ENST00000472779 293 ntBASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 RNA5SP415-201ENST00000517246 115 ntBASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 AP001269.4-201ENST00000609611 512 ntBASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13BQ7Z7G8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 GPR32P1-201ENST00000601788 811 ntBASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 UBQLN4P1-201ENST00000461599 1801 ntBASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 CALY-203ENST00000368558 825 ntTSL 5 BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13BQ7Z7G8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 AC104109.2-201ENST00000602919 1418 ntBASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms