Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 AC112907.2-201ENST00000448639 330 ntBASIC17.69■□□□□ 0.42
RNF44Q7L0R7 AL671277.2-201ENST00000458060 996 ntBASIC17.69■□□□□ 0.42
RNF44Q7L0R7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 AC009065.1-201ENST00000564055 1225 ntBASIC17.69■□□□□ 0.42
RNF44Q7L0R7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 HYMAI.1-201ENST00000620949 238 ntBASIC17.69■□□□□ 0.42
RNF44Q7L0R7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF44Q7L0R7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF44Q7L0R7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF44Q7L0R7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
RNF44Q7L0R7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF44Q7L0R7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF44Q7L0R7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF44Q7L0R7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.68■□□□□ 0.42
RNF44Q7L0R7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF44Q7L0R7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF44Q7L0R7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.68■□□□□ 0.42
RNF44Q7L0R7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF44Q7L0R7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF44Q7L0R7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF44Q7L0R7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF44Q7L0R7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF44Q7L0R7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF44Q7L0R7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF44Q7L0R7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF44Q7L0R7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 AL031133.1-201ENST00000406807 723 ntBASIC17.67■□□□□ 0.42
RNF44Q7L0R7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 AC087388.1-201ENST00000571370 1112 ntBASIC17.67■□□□□ 0.42
RNF44Q7L0R7 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.67■□□□□ 0.42
RNF44Q7L0R7 AC083849.1-201ENST00000615227 514 ntBASIC17.67■□□□□ 0.42
RNF44Q7L0R7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 PKD1P1-201ENST00000458669 6805 ntBASIC17.67■□□□□ 0.42
RNF44Q7L0R7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF44Q7L0R7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 MYLKP1-201ENST00000509077 1580 ntBASIC17.66■□□□□ 0.42
RNF44Q7L0R7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 AL499627.1-201ENST00000569373 2188 ntBASIC17.66■□□□□ 0.42
RNF44Q7L0R7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 AL163051.1-201ENST00000569214 1512 ntBASIC17.66■□□□□ 0.42
RNF44Q7L0R7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF44Q7L0R7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF44Q7L0R7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF44Q7L0R7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
RNF44Q7L0R7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF44Q7L0R7 AC098818.2-201ENST00000564925 2320 ntBASIC17.65■□□□□ 0.42
RNF44Q7L0R7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF44Q7L0R7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF44Q7L0R7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms