Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 MTMR9LP-203ENST00000426597 1545 ntBASIC17■□□□□ 0.31
PTCHD4Q6ZW05 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 AC012313.1-201ENST00000593393 3059 ntBASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 AC239809.2-201ENST00000415381 517 ntBASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTCHD4Q6ZW05 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 AC139713.2-201ENST00000641328 2723 ntBASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 ESRRAP1-201ENST00000400596 1257 ntBASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTCHD4Q6ZW05 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 SLC25A6P5-201ENST00000435663 894 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms