Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 AL353708.3-201ENST00000610272 989 ntBASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TMEM53Q6P2H8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
TMEM53Q6P2H8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TMEM53Q6P2H8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 FLJ38576-201ENST00000623820 2459 ntBASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 NIFKP9-201ENST00000419265 221 ntBASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 KSR1P1-201ENST00000446298 240 ntBASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 AL160286.2-201ENST00000567150 934 ntBASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 AP001412.1-201ENST00000608405 714 ntBASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 AC131212.4-201ENST00000623606 975 ntBASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 HLA-A-209ENST00000638375 975 ntBASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 AP006294.2-201ENST00000641667 209 ntBASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM53Q6P2H8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 AC080080.1-201ENST00000625121 2420 ntBASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 AC073195.1-201ENST00000607241 877 ntBASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM53Q6P2H8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms