Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LPCAT4Q643R3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LPCAT4Q643R3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
LPCAT4Q643R3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LPCAT4Q643R3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LPCAT4Q643R3 TSPY23P-201ENST00000440136 739 ntBASIC17.4■□□□□ 0.38
LPCAT4Q643R3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.4■□□□□ 0.38
LPCAT4Q643R3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.4■□□□□ 0.38
LPCAT4Q643R3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LPCAT4Q643R3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LPCAT4Q643R3 AP006587.1-201ENST00000534129 1502 ntBASIC17.4■□□□□ 0.38
LPCAT4Q643R3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LPCAT4Q643R3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
LPCAT4Q643R3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.39■□□□□ 0.38
LPCAT4Q643R3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LPCAT4Q643R3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LPCAT4Q643R3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LPCAT4Q643R3 AC112777.1-201ENST00000540175 1423 ntBASIC17.39■□□□□ 0.38
LPCAT4Q643R3 AC068338.2-201ENST00000563278 1430 ntBASIC17.39■□□□□ 0.38
LPCAT4Q643R3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.39■□□□□ 0.38
LPCAT4Q643R3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.39■□□□□ 0.37
LPCAT4Q643R3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.39■□□□□ 0.37
LPCAT4Q643R3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
LPCAT4Q643R3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
LPCAT4Q643R3 KRT17P1-201ENST00000399211 1546 ntBASIC17.39■□□□□ 0.37
LPCAT4Q643R3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LPCAT4Q643R3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LPCAT4Q643R3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LPCAT4Q643R3 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.39■□□□□ 0.37
LPCAT4Q643R3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.39■□□□□ 0.37
LPCAT4Q643R3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LPCAT4Q643R3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LPCAT4Q643R3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LPCAT4Q643R3 AL121761.2-201ENST00000598007 1648 ntBASIC17.39■□□□□ 0.37
LPCAT4Q643R3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LPCAT4Q643R3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.39■□□□□ 0.37
LPCAT4Q643R3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LPCAT4Q643R3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LPCAT4Q643R3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
LPCAT4Q643R3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 MIR638-201ENST00000385237 100 ntBASIC17.38■□□□□ 0.37
LPCAT4Q643R3 GPX1P1-201ENST00000388829 606 ntBASIC17.38■□□□□ 0.37
LPCAT4Q643R3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 AL096828.2-201ENST00000567259 1965 ntBASIC17.38■□□□□ 0.37
LPCAT4Q643R3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LPCAT4Q643R3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 AL391005.1-201ENST00000623953 2435 ntBASIC17.37■□□□□ 0.37
LPCAT4Q643R3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 KRT8P45-201ENST00000414328 1447 ntBASIC17.37■□□□□ 0.37
LPCAT4Q643R3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
LPCAT4Q643R3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms