Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CDC42BPAQ5VT25 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CDC42BPAQ5VT25 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CDC42BPAQ5VT25 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
CDC42BPAQ5VT25 COX10-202ENST00000429152 875 ntTSL 2 BASIC27.84■■■□□ 2.05
CDC42BPAQ5VT25 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC27.84■■■□□ 2.05
CDC42BPAQ5VT25 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
CDC42BPAQ5VT25 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC27.84■■■□□ 2.05
CDC42BPAQ5VT25 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC27.84■■■□□ 2.05
CDC42BPAQ5VT25 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CDC42BPAQ5VT25 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CDC42BPAQ5VT25 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
CDC42BPAQ5VT25 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
CDC42BPAQ5VT25 AC099343.3-201ENST00000605834 2503 ntBASIC27.84■■■□□ 2.05
CDC42BPAQ5VT25 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 ADK-206ENST00000541550 2222 ntTSL 2 BASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 RBSN-204ENST00000449050 903 ntTSL 2 BASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 AC092865.5-201ENST00000545435 363 ntBASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 AC021087.4-201ENST00000563761 564 ntBASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 PIN1-206ENST00000587625 878 ntTSL 2 BASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 MTDHP3-201ENST00000594186 672 ntBASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 AC009154.2-201ENST00000621177 724 ntBASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC27.83■■■□□ 2.05
CDC42BPAQ5VT25 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.04
CDC42BPAQ5VT25 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.04
CDC42BPAQ5VT25 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
CDC42BPAQ5VT25 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC27.82■■■□□ 2.04
CDC42BPAQ5VT25 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CDC42BPAQ5VT25 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
CDC42BPAQ5VT25 AP005117.1-201ENST00000584346 1413 ntBASIC27.82■■■□□ 2.04
CDC42BPAQ5VT25 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC27.82■■■□□ 2.04
CDC42BPAQ5VT25 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
CDC42BPAQ5VT25 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
CDC42BPAQ5VT25 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
CDC42BPAQ5VT25 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC27.82■■■□□ 2.04
CDC42BPAQ5VT25 AC034105.1-201ENST00000563488 319 ntBASIC27.82■■■□□ 2.04
CDC42BPAQ5VT25 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC27.82■■■□□ 2.04
CDC42BPAQ5VT25 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC27.82■■■□□ 2.04
CDC42BPAQ5VT25 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CDC42BPAQ5VT25 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CDC42BPAQ5VT25 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CDC42BPAQ5VT25 AC125634.1-201ENST00000438758 1403 ntBASIC27.82■■■□□ 2.04
CDC42BPAQ5VT25 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 AC068472.1-201ENST00000474589 881 ntBASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 AL499627.1-201ENST00000569373 2188 ntBASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 RPL13AP23-201ENST00000480739 586 ntBASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 FAM215A-202ENST00000632077 792 ntBASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC27.81■■■□□ 2.04
CDC42BPAQ5VT25 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 BX842568.4-201ENST00000421222 227 ntBASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 AC098831.1-202ENST00000438821 336 ntBASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 AC132008.2-207ENST00000454517 770 ntBASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 AL139288.1-201ENST00000623748 933 ntBASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
CDC42BPAQ5VT25 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
CDC42BPAQ5VT25 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms