Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC24.79■■□□□ 1.56
COL16A1Q07092 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC24.79■■□□□ 1.56
COL16A1Q07092 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC24.79■■□□□ 1.56
COL16A1Q07092 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC24.79■■□□□ 1.56
COL16A1Q07092 AC136632.2-201ENST00000512891 861 ntBASIC24.79■■□□□ 1.56
COL16A1Q07092 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC24.79■■□□□ 1.56
COL16A1Q07092 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC24.79■■□□□ 1.56
COL16A1Q07092 TCAP-202ENST00000578283 583 ntTSL 5 BASIC24.79■■□□□ 1.56
COL16A1Q07092 AC006557.2-201ENST00000592985 1240 ntBASIC24.79■■□□□ 1.56
COL16A1Q07092 AC068587.9-201ENST00000641814 219 ntBASIC24.79■■□□□ 1.56
COL16A1Q07092 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL16A1Q07092 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL16A1Q07092 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL16A1Q07092 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL16A1Q07092 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL16A1Q07092 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
COL16A1Q07092 SOD2-201ENST00000337404 991 ntTSL 2 BASIC24.79■■□□□ 1.56
COL16A1Q07092 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL16A1Q07092 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
COL16A1Q07092 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
COL16A1Q07092 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC24.79■■□□□ 1.56
COL16A1Q07092 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC24.79■■□□□ 1.56
COL16A1Q07092 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
COL16A1Q07092 LSM12-202ENST00000585388 942 ntTSL 3 BASIC24.79■■□□□ 1.56
COL16A1Q07092 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC24.79■■□□□ 1.56
COL16A1Q07092 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
COL16A1Q07092 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.79■■□□□ 1.56
COL16A1Q07092 GPR89P-201ENST00000407924 1495 ntBASIC24.78■■□□□ 1.56
COL16A1Q07092 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL16A1Q07092 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC24.78■■□□□ 1.56
COL16A1Q07092 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL16A1Q07092 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
COL16A1Q07092 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.78■■□□□ 1.56
COL16A1Q07092 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC24.78■■□□□ 1.56
COL16A1Q07092 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC24.78■■□□□ 1.56
COL16A1Q07092 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
COL16A1Q07092 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC24.78■■□□□ 1.56
COL16A1Q07092 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC24.78■■□□□ 1.56
COL16A1Q07092 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL16A1Q07092 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC24.78■■□□□ 1.56
COL16A1Q07092 Z82202.1-201ENST00000623446 1880 ntBASIC24.78■■□□□ 1.56
COL16A1Q07092 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
COL16A1Q07092 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL16A1Q07092 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
COL16A1Q07092 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC24.77■■□□□ 1.56
COL16A1Q07092 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
COL16A1Q07092 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL16A1Q07092 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
COL16A1Q07092 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC24.77■■□□□ 1.56
COL16A1Q07092 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL16A1Q07092 AL031432.2-201ENST00000566714 459 ntBASIC24.77■■□□□ 1.56
COL16A1Q07092 AL928711.1-201ENST00000570165 459 ntBASIC24.77■■□□□ 1.56
COL16A1Q07092 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC24.77■■□□□ 1.56
COL16A1Q07092 AC005593.1-201ENST00000624894 515 ntBASIC24.77■■□□□ 1.56
COL16A1Q07092 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC24.77■■□□□ 1.56
COL16A1Q07092 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL16A1Q07092 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
COL16A1Q07092 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL16A1Q07092 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL16A1Q07092 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
COL16A1Q07092 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC24.77■■□□□ 1.56
COL16A1Q07092 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL16A1Q07092 AC092474.2-201ENST00000424288 719 ntBASIC24.76■■□□□ 1.55
COL16A1Q07092 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL16A1Q07092 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL16A1Q07092 TAF8-206ENST00000472818 719 ntTSL 2 BASIC24.76■■□□□ 1.55
COL16A1Q07092 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC24.76■■□□□ 1.55
COL16A1Q07092 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC24.76■■□□□ 1.55
COL16A1Q07092 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC24.76■■□□□ 1.55
COL16A1Q07092 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC24.76■■□□□ 1.55
COL16A1Q07092 AF228730.6-201ENST00000641497 218 ntBASIC24.76■■□□□ 1.55
COL16A1Q07092 AC084121.3-201ENST00000641716 218 ntBASIC24.76■■□□□ 1.55
COL16A1Q07092 AC105233.6-201ENST00000642093 218 ntBASIC24.76■■□□□ 1.55
COL16A1Q07092 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL16A1Q07092 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC24.76■■□□□ 1.55
COL16A1Q07092 AL391422.3-201ENST00000603791 2761 ntBASIC24.76■■□□□ 1.55
COL16A1Q07092 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
COL16A1Q07092 CD99-202ENST00000381180 530 ntTSL 2 BASIC24.75■■□□□ 1.55
COL16A1Q07092 AC005034.1-201ENST00000426657 489 ntBASIC24.75■■□□□ 1.55
COL16A1Q07092 MTCL1P1-201ENST00000446207 792 ntBASIC24.75■■□□□ 1.55
COL16A1Q07092 CEND1P1-201ENST00000451006 455 ntBASIC24.75■■□□□ 1.55
COL16A1Q07092 BX005266.1-201ENST00000473402 457 ntBASIC24.75■■□□□ 1.55
COL16A1Q07092 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC24.75■■□□□ 1.55
COL16A1Q07092 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC24.75■■□□□ 1.55
COL16A1Q07092 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
COL16A1Q07092 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC24.75■■□□□ 1.55
COL16A1Q07092 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL16A1Q07092 AC012676.1-201ENST00000574705 1949 ntBASIC24.75■■□□□ 1.55
COL16A1Q07092 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
COL16A1Q07092 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.75■■□□□ 1.55
COL16A1Q07092 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC24.75■■□□□ 1.55
COL16A1Q07092 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC24.75■■□□□ 1.55
COL16A1Q07092 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL16A1Q07092 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
COL16A1Q07092 STOM-202ENST00000347359 870 ntTSL 2 BASIC24.75■■□□□ 1.55
COL16A1Q07092 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
COL16A1Q07092 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC24.75■■□□□ 1.55
COL16A1Q07092 AC108073.2-201ENST00000464002 357 ntBASIC24.75■■□□□ 1.55
COL16A1Q07092 KRT18P41-201ENST00000518924 1277 ntBASIC24.75■■□□□ 1.55
COL16A1Q07092 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms