Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.67■□□□□ 0.26
RPS4XP62701 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4XP62701 MIR3180-5-201ENST00000583743 153 ntBASIC16.67■□□□□ 0.26
RPS4XP62701 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RPS4XP62701 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.67■□□□□ 0.26
RPS4XP62701 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.67■□□□□ 0.26
RPS4XP62701 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4XP62701 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4XP62701 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4XP62701 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4XP62701 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4XP62701 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4XP62701 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS4XP62701 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4XP62701 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS4XP62701 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4XP62701 ESPNP-201ENST00000270691 2015 ntBASIC16.66■□□□□ 0.26
RPS4XP62701 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS4XP62701 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4XP62701 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RPS4XP62701 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RPS4XP62701 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS4XP62701 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS4XP62701 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RPS4XP62701 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4XP62701 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS4XP62701 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4XP62701 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4XP62701 AC073508.3-201ENST00000619697 1419 ntBASIC16.66■□□□□ 0.26
RPS4XP62701 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.66■□□□□ 0.26
RPS4XP62701 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.66■□□□□ 0.26
RPS4XP62701 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4XP62701 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS4XP62701 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RPS4XP62701 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS4XP62701 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4XP62701 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS4XP62701 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RPS4XP62701 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4XP62701 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS4XP62701 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4XP62701 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RPS4XP62701 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4XP62701 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4XP62701 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RPS4XP62701 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.65■□□□□ 0.26
RPS4XP62701 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.65■□□□□ 0.26
RPS4XP62701 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.65■□□□□ 0.26
RPS4XP62701 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4XP62701 TSPY14P-201ENST00000303979 915 ntBASIC16.65■□□□□ 0.26
RPS4XP62701 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4XP62701 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4XP62701 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4XP62701 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.65■□□□□ 0.26
RPS4XP62701 DUX4L26-201ENST00000489078 1255 ntBASIC16.65■□□□□ 0.26
RPS4XP62701 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.65■□□□□ 0.26
RPS4XP62701 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.65■□□□□ 0.26
RPS4XP62701 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RPS4XP62701 AL023803.3-201ENST00000615559 522 ntBASIC16.65■□□□□ 0.26
RPS4XP62701 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4XP62701 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4XP62701 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4XP62701 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4XP62701 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.65■□□□□ 0.26
RPS4XP62701 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.65■□□□□ 0.26
RPS4XP62701 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4XP62701 AC068880.1-201ENST00000507289 2297 ntBASIC16.65■□□□□ 0.26
RPS4XP62701 AL133373.2-201ENST00000623187 2828 ntBASIC16.65■□□□□ 0.26
RPS4XP62701 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RPS4XP62701 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.64■□□□□ 0.26
RPS4XP62701 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
RPS4XP62701 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4XP62701 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RPS4XP62701 AC018470.1-201ENST00000624790 3129 ntBASIC16.64■□□□□ 0.25
RPS4XP62701 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RPS4XP62701 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
RPS4XP62701 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4XP62701 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4XP62701 SLC25A1P2-201ENST00000430693 912 ntBASIC16.64■□□□□ 0.25
RPS4XP62701 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RPS4XP62701 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4XP62701 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4XP62701 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.64■□□□□ 0.25
RPS4XP62701 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.64■□□□□ 0.25
RPS4XP62701 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4XP62701 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4XP62701 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4XP62701 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4XP62701 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RPS4XP62701 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4XP62701 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4XP62701 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4XP62701 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RPS4XP62701 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4XP62701 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4XP62701 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4XP62701 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4XP62701 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4XP62701 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4XP62701 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms