Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.82■□□□□ 0.28
CXCR4P61073 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CXCR4P61073 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CXCR4P61073 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCR4P61073 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CXCR4P61073 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCR4P61073 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CXCR4P61073 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCR4P61073 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.82■□□□□ 0.28
CXCR4P61073 AL121761.2-201ENST00000598007 1648 ntBASIC16.82■□□□□ 0.28
CXCR4P61073 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCR4P61073 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCR4P61073 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCR4P61073 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CXCR4P61073 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CXCR4P61073 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCR4P61073 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCR4P61073 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.82■□□□□ 0.28
CXCR4P61073 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.82■□□□□ 0.28
CXCR4P61073 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.82■□□□□ 0.28
CXCR4P61073 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.82■□□□□ 0.28
CXCR4P61073 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CXCR4P61073 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.82■□□□□ 0.28
CXCR4P61073 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.82■□□□□ 0.28
CXCR4P61073 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCR4P61073 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCR4P61073 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCR4P61073 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CXCR4P61073 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCR4P61073 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.82■□□□□ 0.28
CXCR4P61073 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.81■□□□□ 0.28
CXCR4P61073 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.81■□□□□ 0.28
CXCR4P61073 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CXCR4P61073 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CXCR4P61073 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.81■□□□□ 0.28
CXCR4P61073 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.81■□□□□ 0.28
CXCR4P61073 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CXCR4P61073 AC106820.2-201ENST00000563775 3264 ntBASIC16.81■□□□□ 0.28
CXCR4P61073 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.81■□□□□ 0.28
CXCR4P61073 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.81■□□□□ 0.28
CXCR4P61073 AC098934.4-201ENST00000564127 592 ntBASIC16.81■□□□□ 0.28
CXCR4P61073 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.81■□□□□ 0.28
CXCR4P61073 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CXCR4P61073 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CXCR4P61073 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.81■□□□□ 0.28
CXCR4P61073 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.81■□□□□ 0.28
CXCR4P61073 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.81■□□□□ 0.28
CXCR4P61073 MYLKP1-201ENST00000509077 1580 ntBASIC16.81■□□□□ 0.28
CXCR4P61073 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.81■□□□□ 0.28
CXCR4P61073 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCR4P61073 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.8■□□□□ 0.28
CXCR4P61073 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.8■□□□□ 0.28
CXCR4P61073 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.8■□□□□ 0.28
CXCR4P61073 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCR4P61073 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCR4P61073 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.8■□□□□ 0.28
CXCR4P61073 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.8■□□□□ 0.28
CXCR4P61073 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.8■□□□□ 0.28
CXCR4P61073 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CXCR4P61073 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CXCR4P61073 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCR4P61073 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCR4P61073 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCR4P61073 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCR4P61073 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CXCR4P61073 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.8■□□□□ 0.28
CXCR4P61073 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CXCR4P61073 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCR4P61073 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.8■□□□□ 0.28
CXCR4P61073 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.8■□□□□ 0.28
CXCR4P61073 AL138781.1-201ENST00000566567 1274 ntBASIC16.8■□□□□ 0.28
CXCR4P61073 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CXCR4P61073 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCR4P61073 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.8■□□□□ 0.28
CXCR4P61073 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCR4P61073 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.8■□□□□ 0.28
CXCR4P61073 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CXCR4P61073 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCR4P61073 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CXCR4P61073 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.8■□□□□ 0.28
CXCR4P61073 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms