Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 TCAF2P1-201ENST00000291129 2421 ntBASIC13.92□□□□□ -0.18
HIST1H2BDP58876 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 AL356652.1-201ENST00000615962 565 ntBASIC13.92□□□□□ -0.18
HIST1H2BDP58876 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H2BDP58876 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 AC104417.2-201ENST00000562989 1793 ntBASIC13.91□□□□□ -0.18
HIST1H2BDP58876 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 AC024909.3-201ENST00000611513 2257 ntBASIC13.91□□□□□ -0.18
HIST1H2BDP58876 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 AC007322.3-201ENST00000426526 701 ntBASIC13.91□□□□□ -0.18
HIST1H2BDP58876 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 MTDHP2-201ENST00000601468 714 ntBASIC13.91□□□□□ -0.18
HIST1H2BDP58876 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HIST1H2BDP58876 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2BDP58876 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2BDP58876 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.9□□□□□ -0.18
HIST1H2BDP58876 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2BDP58876 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2BDP58876 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2BDP58876 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2BDP58876 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.9□□□□□ -0.18
HIST1H2BDP58876 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
HIST1H2BDP58876 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2BDP58876 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC13.9□□□□□ -0.18
HIST1H2BDP58876 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms