Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 KRT8P32-201ENST00000512863 1461 ntBASIC17.69■□□□□ 0.42
CLDN6P56747 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN6P56747 AC034236.2-201ENST00000606662 1610 ntBASIC17.69■□□□□ 0.42
CLDN6P56747 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CLDN6P56747 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN6P56747 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN6P56747 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLDN6P56747 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN6P56747 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN6P56747 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.68■□□□□ 0.42
CLDN6P56747 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN6P56747 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN6P56747 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN6P56747 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.68■□□□□ 0.42
CLDN6P56747 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN6P56747 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.68■□□□□ 0.42
CLDN6P56747 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CLDN6P56747 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN6P56747 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN6P56747 KRT18P67-201ENST00000432816 1264 ntBASIC17.68■□□□□ 0.42
CLDN6P56747 AC096582.2-201ENST00000510860 516 ntBASIC17.68■□□□□ 0.42
CLDN6P56747 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN6P56747 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN6P56747 KRT18P58-201ENST00000527480 1120 ntBASIC17.68■□□□□ 0.42
CLDN6P56747 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.68■□□□□ 0.42
CLDN6P56747 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.68■□□□□ 0.42
CLDN6P56747 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.68■□□□□ 0.42
CLDN6P56747 AC011840.4-201ENST00000578471 627 ntBASIC17.68■□□□□ 0.42
CLDN6P56747 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN6P56747 AL591684.3-201ENST00000605187 298 ntBASIC17.68■□□□□ 0.42
CLDN6P56747 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.68■□□□□ 0.42
CLDN6P56747 MIR7706-201ENST00000613747 67 ntBASIC17.68■□□□□ 0.42
CLDN6P56747 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLDN6P56747 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN6P56747 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CLDN6P56747 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CLDN6P56747 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN6P56747 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN6P56747 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN6P56747 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN6P56747 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN6P56747 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN6P56747 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN6P56747 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLDN6P56747 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLDN6P56747 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN6P56747 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN6P56747 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CLDN6P56747 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN6P56747 AC092183.1-201ENST00000469884 875 ntBASIC17.67■□□□□ 0.42
CLDN6P56747 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.67■□□□□ 0.42
CLDN6P56747 AC064862.7-201ENST00000604520 867 ntBASIC17.67■□□□□ 0.42
CLDN6P56747 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN6P56747 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN6P56747 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CLDN6P56747 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN6P56747 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN6P56747 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN6P56747 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN6P56747 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLDN6P56747 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN6P56747 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN6P56747 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN6P56747 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN6P56747 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN6P56747 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CLDN6P56747 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN6P56747 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN6P56747 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN6P56747 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN6P56747 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN6P56747 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN6P56747 AC132008.2-207ENST00000454517 770 ntBASIC17.66■□□□□ 0.42
CLDN6P56747 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CLDN6P56747 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.66■□□□□ 0.42
CLDN6P56747 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN6P56747 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN6P56747 MIR5100-201ENST00000579544 119 ntBASIC17.66■□□□□ 0.42
CLDN6P56747 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.66■□□□□ 0.42
CLDN6P56747 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN6P56747 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLDN6P56747 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
CLDN6P56747 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN6P56747 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLDN6P56747 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.66■□□□□ 0.42
CLDN6P56747 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN6P56747 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN6P56747 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN6P56747 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN6P56747 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN6P56747 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN6P56747 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN6P56747 IRX1P1-201ENST00000438849 1838 ntBASIC17.65■□□□□ 0.42
CLDN6P56747 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLDN6P56747 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN6P56747 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN6P56747 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN6P56747 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN6P56747 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN6P56747 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms