Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
SMARCA4P51532 PMP22-202ENST00000395936 816 ntTSL 3 BASIC32.91■■■□□ 2.86
SMARCA4P51532 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC32.91■■■□□ 2.86
SMARCA4P51532 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC32.91■■■□□ 2.86
SMARCA4P51532 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC32.91■■■□□ 2.86
SMARCA4P51532 MTDHP4-201ENST00000600287 670 ntBASIC32.91■■■□□ 2.86
SMARCA4P51532 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
SMARCA4P51532 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC32.91■■■□□ 2.86
SMARCA4P51532 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC32.91■■■□□ 2.86
SMARCA4P51532 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
SMARCA4P51532 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
SMARCA4P51532 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
SMARCA4P51532 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
SMARCA4P51532 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
SMARCA4P51532 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
SMARCA4P51532 CTNS-203ENST00000399306 803 ntTSL 3 BASIC32.91■■■□□ 2.86
SMARCA4P51532 KRT18P27-201ENST00000427733 1299 ntBASIC32.91■■■□□ 2.86
SMARCA4P51532 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
SMARCA4P51532 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC32.91■■■□□ 2.86
SMARCA4P51532 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC32.91■■■□□ 2.86
SMARCA4P51532 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC32.91■■■□□ 2.86
SMARCA4P51532 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
SMARCA4P51532 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC32.91■■■□□ 2.86
SMARCA4P51532 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
SMARCA4P51532 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
SMARCA4P51532 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
SMARCA4P51532 AL157384.1-201ENST00000445995 2473 ntBASIC32.9■■■□□ 2.86
SMARCA4P51532 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC32.9■■■□□ 2.86
SMARCA4P51532 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
SMARCA4P51532 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
SMARCA4P51532 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
SMARCA4P51532 AC002347.1-201ENST00000569543 541 ntBASIC32.9■■■□□ 2.86
SMARCA4P51532 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC32.9■■■□□ 2.86
SMARCA4P51532 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
SMARCA4P51532 POLI-202ENST00000406285 2030 ntTSL 2 BASIC32.89■■■□□ 2.86
SMARCA4P51532 SDHAP2-201ENST00000455183 2001 ntBASIC32.89■■■□□ 2.86
SMARCA4P51532 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC32.89■■■□□ 2.86
SMARCA4P51532 FUOM-202ENST00000368551 628 ntTSL 3 BASIC32.89■■■□□ 2.86
SMARCA4P51532 CRCP-205ENST00000431089 942 ntTSL 2 BASIC32.89■■■□□ 2.86
SMARCA4P51532 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC32.89■■■□□ 2.86
SMARCA4P51532 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC32.89■■■□□ 2.86
SMARCA4P51532 LINC02084-201ENST00000606069 1096 ntBASIC32.89■■■□□ 2.86
SMARCA4P51532 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
SMARCA4P51532 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC32.89■■■□□ 2.86
SMARCA4P51532 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
SMARCA4P51532 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
SMARCA4P51532 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC32.89■■■□□ 2.86
SMARCA4P51532 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC32.89■■■□□ 2.86
SMARCA4P51532 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
SMARCA4P51532 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC32.89■■■□□ 2.86
SMARCA4P51532 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
SMARCA4P51532 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC32.88■■■□□ 2.85
SMARCA4P51532 LAGE3P1-201ENST00000425356 484 ntBASIC32.88■■■□□ 2.85
SMARCA4P51532 AC009947.1-201ENST00000444350 727 ntBASIC32.88■■■□□ 2.85
SMARCA4P51532 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC32.88■■■□□ 2.85
SMARCA4P51532 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC32.88■■■□□ 2.85
SMARCA4P51532 COX5A-204ENST00000567270 579 ntTSL 3 BASIC32.88■■■□□ 2.85
SMARCA4P51532 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
SMARCA4P51532 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
SMARCA4P51532 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC32.88■■■□□ 2.85
SMARCA4P51532 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC32.88■■■□□ 2.85
SMARCA4P51532 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC32.88■■■□□ 2.85
SMARCA4P51532 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.88■■■□□ 2.85
SMARCA4P51532 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
SMARCA4P51532 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC32.88■■■□□ 2.85
SMARCA4P51532 ALG1L5P-201ENST00000482043 771 ntBASIC32.88■■■□□ 2.85
SMARCA4P51532 AC112482.1-201ENST00000492080 688 ntBASIC32.88■■■□□ 2.85
SMARCA4P51532 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC32.88■■■□□ 2.85
SMARCA4P51532 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
SMARCA4P51532 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
SMARCA4P51532 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC32.87■■■□□ 2.85
SMARCA4P51532 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC32.87■■■□□ 2.85
SMARCA4P51532 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
SMARCA4P51532 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC32.87■■■□□ 2.85
SMARCA4P51532 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC32.87■■■□□ 2.85
SMARCA4P51532 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
SMARCA4P51532 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC32.87■■■□□ 2.85
SMARCA4P51532 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
SMARCA4P51532 RNA5SP416-201ENST00000516838 111 ntBASIC32.87■■■□□ 2.85
SMARCA4P51532 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC32.87■■■□□ 2.85
SMARCA4P51532 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC32.87■■■□□ 2.85
SMARCA4P51532 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC32.87■■■□□ 2.85
SMARCA4P51532 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC32.87■■■□□ 2.85
SMARCA4P51532 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
SMARCA4P51532 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC32.86■■■□□ 2.85
SMARCA4P51532 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC32.86■■■□□ 2.85
SMARCA4P51532 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC32.86■■■□□ 2.85
SMARCA4P51532 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC32.86■■■□□ 2.85
SMARCA4P51532 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
SMARCA4P51532 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
SMARCA4P51532 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
SMARCA4P51532 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
SMARCA4P51532 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
SMARCA4P51532 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC32.85■■■□□ 2.85
SMARCA4P51532 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC32.85■■■□□ 2.85
SMARCA4P51532 COA5-202ENST00000409997 557 ntTSL 4 BASIC32.85■■■□□ 2.85
SMARCA4P51532 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC32.85■■■□□ 2.85
SMARCA4P51532 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
SMARCA4P51532 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC32.85■■■□□ 2.85
SMARCA4P51532 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC32.85■■■□□ 2.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms