Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABRA4P48169 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.45■□□□□ 0.38
GABRA4P48169 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABRA4P48169 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABRA4P48169 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
GABRA4P48169 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.45■□□□□ 0.38
GABRA4P48169 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.45■□□□□ 0.38
GABRA4P48169 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GABRA4P48169 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABRA4P48169 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABRA4P48169 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.45■□□□□ 0.38
GABRA4P48169 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.45■□□□□ 0.38
GABRA4P48169 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GABRA4P48169 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.45■□□□□ 0.38
GABRA4P48169 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.45■□□□□ 0.38
GABRA4P48169 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.45■□□□□ 0.38
GABRA4P48169 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.45■□□□□ 0.38
GABRA4P48169 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.45■□□□□ 0.38
GABRA4P48169 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.45■□□□□ 0.38
GABRA4P48169 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.45■□□□□ 0.38
GABRA4P48169 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
GABRA4P48169 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
GABRA4P48169 AC092119.3-201ENST00000612618 583 ntBASIC17.45■□□□□ 0.38
GABRA4P48169 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.45■□□□□ 0.38
GABRA4P48169 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.45■□□□□ 0.38
GABRA4P48169 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABRA4P48169 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
GABRA4P48169 BX323043.1-201ENST00000641006 1765 ntBASIC17.45■□□□□ 0.38
GABRA4P48169 AP000974.1-201ENST00000623909 2387 ntBASIC17.45■□□□□ 0.38
GABRA4P48169 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABRA4P48169 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABRA4P48169 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GABRA4P48169 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
GABRA4P48169 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABRA4P48169 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABRA4P48169 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GABRA4P48169 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABRA4P48169 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GABRA4P48169 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GABRA4P48169 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.44■□□□□ 0.38
GABRA4P48169 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.44■□□□□ 0.38
GABRA4P48169 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GABRA4P48169 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GABRA4P48169 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABRA4P48169 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABRA4P48169 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.44■□□□□ 0.38
GABRA4P48169 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GABRA4P48169 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.44■□□□□ 0.38
GABRA4P48169 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.44■□□□□ 0.38
GABRA4P48169 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.44■□□□□ 0.38
GABRA4P48169 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABRA4P48169 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABRA4P48169 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABRA4P48169 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
GABRA4P48169 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
GABRA4P48169 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABRA4P48169 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABRA4P48169 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABRA4P48169 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABRA4P48169 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
GABRA4P48169 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GABRA4P48169 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABRA4P48169 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABRA4P48169 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABRA4P48169 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.43■□□□□ 0.38
GABRA4P48169 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GABRA4P48169 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GABRA4P48169 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GABRA4P48169 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABRA4P48169 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.43■□□□□ 0.38
GABRA4P48169 AP002414.4-201ENST00000589764 1148 ntBASIC17.43■□□□□ 0.38
GABRA4P48169 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABRA4P48169 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABRA4P48169 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABRA4P48169 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.43■□□□□ 0.38
GABRA4P48169 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABRA4P48169 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABRA4P48169 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
GABRA4P48169 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.43■□□□□ 0.38
GABRA4P48169 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.43■□□□□ 0.38
GABRA4P48169 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABRA4P48169 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABRA4P48169 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
GABRA4P48169 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.42■□□□□ 0.38
GABRA4P48169 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABRA4P48169 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABRA4P48169 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
GABRA4P48169 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GABRA4P48169 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
GABRA4P48169 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABRA4P48169 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
GABRA4P48169 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.42■□□□□ 0.38
GABRA4P48169 DRAXINP1-201ENST00000437611 948 ntBASIC17.42■□□□□ 0.38
GABRA4P48169 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.42■□□□□ 0.38
GABRA4P48169 RN7SL606P-201ENST00000472779 293 ntBASIC17.42■□□□□ 0.38
GABRA4P48169 AC113404.2-201ENST00000507884 177 ntBASIC17.42■□□□□ 0.38
GABRA4P48169 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.42■□□□□ 0.38
GABRA4P48169 TPSP2-201ENST00000561760 610 ntBASIC17.42■□□□□ 0.38
GABRA4P48169 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.42■□□□□ 0.38
GABRA4P48169 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms