Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCC3P46736 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCC3P46736 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
BRCC3P46736 SDHAP2-201ENST00000455183 2001 ntBASIC19.6■□□□□ 0.73
BRCC3P46736 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCC3P46736 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.6■□□□□ 0.73
BRCC3P46736 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BRCC3P46736 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BRCC3P46736 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.6■□□□□ 0.73
BRCC3P46736 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BRCC3P46736 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.6■□□□□ 0.73
BRCC3P46736 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.6■□□□□ 0.73
BRCC3P46736 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.6■□□□□ 0.73
BRCC3P46736 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.6■□□□□ 0.73
BRCC3P46736 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.6■□□□□ 0.73
BRCC3P46736 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.6■□□□□ 0.73
BRCC3P46736 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
BRCC3P46736 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
BRCC3P46736 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
BRCC3P46736 AC004263.2-201ENST00000617183 678 ntBASIC19.6■□□□□ 0.73
BRCC3P46736 AC124864.1-201ENST00000623408 392 ntBASIC19.6■□□□□ 0.73
BRCC3P46736 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
BRCC3P46736 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
BRCC3P46736 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCC3P46736 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.6■□□□□ 0.73
BRCC3P46736 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRCC3P46736 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.59■□□□□ 0.73
BRCC3P46736 AC112777.1-201ENST00000540175 1423 ntBASIC19.59■□□□□ 0.73
BRCC3P46736 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRCC3P46736 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRCC3P46736 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.59■□□□□ 0.73
BRCC3P46736 AC005082.1-201ENST00000413042 2259 ntBASIC19.59■□□□□ 0.73
BRCC3P46736 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRCC3P46736 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRCC3P46736 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRCC3P46736 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.59■□□□□ 0.73
BRCC3P46736 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRCC3P46736 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
BRCC3P46736 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.59■□□□□ 0.73
BRCC3P46736 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.59■□□□□ 0.73
BRCC3P46736 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
BRCC3P46736 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.59■□□□□ 0.73
BRCC3P46736 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRCC3P46736 AL592071.1-201ENST00000611956 408 ntBASIC19.59■□□□□ 0.73
BRCC3P46736 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.59■□□□□ 0.73
BRCC3P46736 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
BRCC3P46736 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.59■□□□□ 0.73
BRCC3P46736 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
BRCC3P46736 KRT89P-201ENST00000620027 1478 ntBASIC19.59■□□□□ 0.73
BRCC3P46736 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRCC3P46736 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRCC3P46736 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRCC3P46736 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRCC3P46736 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRCC3P46736 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRCC3P46736 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRCC3P46736 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
BRCC3P46736 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
BRCC3P46736 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRCC3P46736 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRCC3P46736 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
BRCC3P46736 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.58■□□□□ 0.73
BRCC3P46736 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRCC3P46736 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
BRCC3P46736 UNC93B7-201ENST00000509439 705 ntBASIC19.58■□□□□ 0.72
BRCC3P46736 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.58■□□□□ 0.72
BRCC3P46736 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRCC3P46736 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRCC3P46736 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BRCC3P46736 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.58■□□□□ 0.72
BRCC3P46736 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRCC3P46736 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.58■□□□□ 0.72
BRCC3P46736 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRCC3P46736 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCC3P46736 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCC3P46736 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCC3P46736 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCC3P46736 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.57■□□□□ 0.72
BRCC3P46736 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BRCC3P46736 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.57■□□□□ 0.72
BRCC3P46736 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.57■□□□□ 0.72
BRCC3P46736 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCC3P46736 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCC3P46736 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCC3P46736 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCC3P46736 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCC3P46736 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BRCC3P46736 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCC3P46736 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCC3P46736 RN7SL606P-201ENST00000472779 293 ntBASIC19.57■□□□□ 0.72
BRCC3P46736 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.57■□□□□ 0.72
BRCC3P46736 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
BRCC3P46736 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
BRCC3P46736 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCC3P46736 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCC3P46736 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRCC3P46736 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRCC3P46736 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRCC3P46736 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRCC3P46736 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms