Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CHRNA4P43681 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 AL354751.1-201ENST00000412768 1863 ntBASIC18.61■□□□□ 0.57
CHRNA4P43681 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNA4P43681 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHRNA4P43681 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHRNA4P43681 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHRNA4P43681 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNA4P43681 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 SEC1P-202ENST00000473944 940 ntBASIC18.61■□□□□ 0.57
CHRNA4P43681 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNA4P43681 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHRNA4P43681 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNA4P43681 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.61■□□□□ 0.57
CHRNA4P43681 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNA4P43681 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.61■□□□□ 0.57
CHRNA4P43681 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 AC141257.4-201ENST00000634557 245 ntBASIC18.61■□□□□ 0.57
CHRNA4P43681 AC136944.6-201ENST00000634818 245 ntBASIC18.61■□□□□ 0.57
CHRNA4P43681 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CHRNA4P43681 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 AL390961.4-201ENST00000623958 2535 ntBASIC18.61■□□□□ 0.57
CHRNA4P43681 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CHRNA4P43681 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHRNA4P43681 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
CHRNA4P43681 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA4P43681 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRNA4P43681 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRNA4P43681 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CHRNA4P43681 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA4P43681 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA4P43681 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CHRNA4P43681 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA4P43681 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA4P43681 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CHRNA4P43681 KRT8P7-201ENST00000533003 1432 ntBASIC18.6■□□□□ 0.57
CHRNA4P43681 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CHRNA4P43681 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA4P43681 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.6■□□□□ 0.57
CHRNA4P43681 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.6■□□□□ 0.57
CHRNA4P43681 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA4P43681 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRNA4P43681 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.6■□□□□ 0.57
CHRNA4P43681 SDHAP2-201ENST00000455183 2001 ntBASIC18.6■□□□□ 0.57
CHRNA4P43681 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CHRNA4P43681 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA4P43681 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA4P43681 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA4P43681 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA4P43681 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA4P43681 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA4P43681 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA4P43681 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA4P43681 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.59■□□□□ 0.57
CHRNA4P43681 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA4P43681 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRNA4P43681 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRNA4P43681 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA4P43681 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA4P43681 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA4P43681 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA4P43681 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA4P43681 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA4P43681 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRNA4P43681 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA4P43681 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.59■□□□□ 0.57
CHRNA4P43681 AC104390.1-201ENST00000555663 520 ntBASIC18.59■□□□□ 0.57
CHRNA4P43681 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.59■□□□□ 0.57
CHRNA4P43681 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRNA4P43681 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.59■□□□□ 0.57
CHRNA4P43681 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.59■□□□□ 0.57
CHRNA4P43681 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.59■□□□□ 0.57
CHRNA4P43681 AC005363.2-201ENST00000618631 242 ntBASIC18.59■□□□□ 0.57
CHRNA4P43681 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA4P43681 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CHRNA4P43681 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRNA4P43681 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CHRNA4P43681 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA4P43681 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHRNA4P43681 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA4P43681 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRNA4P43681 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRNA4P43681 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA4P43681 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA4P43681 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CHRNA4P43681 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA4P43681 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA4P43681 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms