Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HMGCLP35914 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGCLP35914 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.36■□□□□ 0.53
HMGCLP35914 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLP35914 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLP35914 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLP35914 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLP35914 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLP35914 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HMGCLP35914 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
HMGCLP35914 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLP35914 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
HMGCLP35914 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLP35914 FAM8A6P-201ENST00000407496 1135 ntBASIC18.36■□□□□ 0.53
HMGCLP35914 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
HMGCLP35914 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLP35914 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.36■□□□□ 0.53
HMGCLP35914 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.36■□□□□ 0.53
HMGCLP35914 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLP35914 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.36■□□□□ 0.53
HMGCLP35914 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.36■□□□□ 0.53
HMGCLP35914 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.36■□□□□ 0.53
HMGCLP35914 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
HMGCLP35914 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.36■□□□□ 0.53
HMGCLP35914 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLP35914 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
HMGCLP35914 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLP35914 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLP35914 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLP35914 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLP35914 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLP35914 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.35■□□□□ 0.53
HMGCLP35914 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLP35914 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGCLP35914 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.35■□□□□ 0.53
HMGCLP35914 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLP35914 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLP35914 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLP35914 SPDYE15P-201ENST00000424157 909 ntBASIC18.35■□□□□ 0.53
HMGCLP35914 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.35■□□□□ 0.53
HMGCLP35914 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
HMGCLP35914 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HMGCLP35914 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLP35914 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGCLP35914 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLP35914 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLP35914 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLP35914 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HMGCLP35914 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLP35914 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLP35914 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLP35914 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLP35914 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.34■□□□□ 0.53
HMGCLP35914 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.34■□□□□ 0.53
HMGCLP35914 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.34■□□□□ 0.53
HMGCLP35914 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGCLP35914 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLP35914 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLP35914 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLP35914 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HMGCLP35914 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HMGCLP35914 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLP35914 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLP35914 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.34■□□□□ 0.53
HMGCLP35914 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.34■□□□□ 0.53
HMGCLP35914 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.34■□□□□ 0.53
HMGCLP35914 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGCLP35914 AC022616.7-201ENST00000525383 220 ntBASIC18.34■□□□□ 0.53
HMGCLP35914 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLP35914 LINC01238-205ENST00000567549 1107 ntBASIC18.34■□□□□ 0.53
HMGCLP35914 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.34■□□□□ 0.53
HMGCLP35914 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLP35914 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLP35914 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.34■□□□□ 0.53
HMGCLP35914 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.34■□□□□ 0.53
HMGCLP35914 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.34■□□□□ 0.53
HMGCLP35914 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGCLP35914 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGCLP35914 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.34■□□□□ 0.53
HMGCLP35914 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLP35914 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLP35914 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGCLP35914 GMCL1P1-201ENST00000463439 1581 ntBASIC18.34■□□□□ 0.53
HMGCLP35914 AL162741.1-201ENST00000565563 1558 ntBASIC18.34■□□□□ 0.53
HMGCLP35914 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
HMGCLP35914 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
HMGCLP35914 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.33■□□□□ 0.53
HMGCLP35914 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCLP35914 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.33■□□□□ 0.53
HMGCLP35914 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.33■□□□□ 0.53
HMGCLP35914 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
HMGCLP35914 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCLP35914 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
HMGCLP35914 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCLP35914 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
HMGCLP35914 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLP35914 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.33■□□□□ 0.52
HMGCLP35914 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLP35914 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.33■□□□□ 0.52
HMGCLP35914 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms