Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RXRBP28702 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC24.08■■□□□ 1.45
RXRBP28702 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC24.08■■□□□ 1.45
RXRBP28702 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
RXRBP28702 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.08■■□□□ 1.45
RXRBP28702 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
RXRBP28702 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.08■■□□□ 1.44
RXRBP28702 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
RXRBP28702 LINC01521-201ENST00000504184 1943 ntBASIC24.08■■□□□ 1.44
RXRBP28702 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
RXRBP28702 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC24.08■■□□□ 1.44
RXRBP28702 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RXRBP28702 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RXRBP28702 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC24.07■■□□□ 1.44
RXRBP28702 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RXRBP28702 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC24.07■■□□□ 1.44
RXRBP28702 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC24.07■■□□□ 1.44
RXRBP28702 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC24.07■■□□□ 1.44
RXRBP28702 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
RXRBP28702 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
RXRBP28702 MTCL1P1-201ENST00000446207 792 ntBASIC24.07■■□□□ 1.44
RXRBP28702 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RXRBP28702 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC24.07■■□□□ 1.44
RXRBP28702 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC24.07■■□□□ 1.44
RXRBP28702 MIR4751-201ENST00000578027 74 ntBASIC24.07■■□□□ 1.44
RXRBP28702 RN7SL204P-201ENST00000582831 262 ntBASIC24.07■■□□□ 1.44
RXRBP28702 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RXRBP28702 YTHDF3-AS1-201ENST00000603538 718 ntBASIC24.07■■□□□ 1.44
RXRBP28702 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RXRBP28702 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
RXRBP28702 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
RXRBP28702 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RXRBP28702 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RXRBP28702 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RXRBP28702 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RXRBP28702 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC24.06■■□□□ 1.44
RXRBP28702 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
RXRBP28702 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RXRBP28702 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RXRBP28702 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC24.06■■□□□ 1.44
RXRBP28702 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RXRBP28702 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
RXRBP28702 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC24.06■■□□□ 1.44
RXRBP28702 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC24.06■■□□□ 1.44
RXRBP28702 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC24.06■■□□□ 1.44
RXRBP28702 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
RXRBP28702 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RXRBP28702 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RXRBP28702 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
RXRBP28702 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC24.05■■□□□ 1.44
RXRBP28702 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RXRBP28702 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RXRBP28702 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RXRBP28702 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RXRBP28702 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RXRBP28702 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RXRBP28702 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC24.05■■□□□ 1.44
RXRBP28702 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RXRBP28702 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RXRBP28702 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
RXRBP28702 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC24.05■■□□□ 1.44
RXRBP28702 DDT-204ENST00000404092 805 ntTSL 3 BASIC24.05■■□□□ 1.44
RXRBP28702 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RXRBP28702 AC004461.1-201ENST00000412461 403 ntBASIC24.05■■□□□ 1.44
RXRBP28702 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RXRBP28702 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RXRBP28702 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
RXRBP28702 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC24.05■■□□□ 1.44
RXRBP28702 NMU-203ENST00000507338 658 ntTSL 3 BASIC24.05■■□□□ 1.44
RXRBP28702 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RXRBP28702 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC24.05■■□□□ 1.44
RXRBP28702 LINC00628-201ENST00000628516 1289 ntBASIC24.05■■□□□ 1.44
RXRBP28702 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC24.05■■□□□ 1.44
RXRBP28702 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
RXRBP28702 AF106564.1-201ENST00000607058 2553 ntBASIC24.05■■□□□ 1.44
RXRBP28702 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RXRBP28702 KRT8P32-201ENST00000512863 1461 ntBASIC24.05■■□□□ 1.44
RXRBP28702 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RXRBP28702 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC24.05■■□□□ 1.44
RXRBP28702 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RXRBP28702 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.05■■□□□ 1.44
RXRBP28702 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RXRBP28702 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RXRBP28702 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RXRBP28702 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC24.04■■□□□ 1.44
RXRBP28702 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RXRBP28702 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RXRBP28702 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RXRBP28702 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
RXRBP28702 CBR1-202ENST00000399191 838 ntTSL 3 BASIC24.04■■□□□ 1.44
RXRBP28702 TFAMP1-201ENST00000412727 736 ntBASIC24.04■■□□□ 1.44
RXRBP28702 FAM58CP-201ENST00000435741 640 ntBASIC24.04■■□□□ 1.44
RXRBP28702 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RXRBP28702 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC24.04■■□□□ 1.44
RXRBP28702 DUX4L27-201ENST00000554796 1261 ntBASIC24.04■■□□□ 1.44
RXRBP28702 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC24.04■■□□□ 1.44
RXRBP28702 AL606495.2-201ENST00000605867 535 ntBASIC24.04■■□□□ 1.44
RXRBP28702 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RXRBP28702 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC24.04■■□□□ 1.44
RXRBP28702 AL357033.4-201ENST00000617703 1807 ntBASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms