Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB4AP20338 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 NKILA-202ENST00000614771 2598 ntBASIC14.15□□□□□ -0.14
RAB4AP20338 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB4AP20338 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAB4AP20338 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAB4AP20338 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC14.15□□□□□ -0.15
RAB4AP20338 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB4AP20338 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB4AP20338 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB4AP20338 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
RAB4AP20338 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB4AP20338 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.14□□□□□ -0.15
RAB4AP20338 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.14□□□□□ -0.15
RAB4AP20338 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.14□□□□□ -0.15
RAB4AP20338 AC106739.1-201ENST00000617035 715 ntBASIC14.14□□□□□ -0.15
RAB4AP20338 MIR6084-201ENST00000622012 110 ntBASIC14.14□□□□□ -0.15
RAB4AP20338 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB4AP20338 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB4AP20338 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RAB4AP20338 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RAB4AP20338 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
RAB4AP20338 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
RAB4AP20338 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 AC019069.1-201ENST00000610008 1333 ntBASIC14.14□□□□□ -0.15
RAB4AP20338 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB4AP20338 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB4AP20338 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB4AP20338 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAB4AP20338 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB4AP20338 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB4AP20338 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAB4AP20338 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.13□□□□□ -0.15
RAB4AP20338 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB4AP20338 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
RAB4AP20338 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RAB4AP20338 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB4AP20338 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB4AP20338 AC011676.5-201ENST00000624864 2660 ntBASIC14.13□□□□□ -0.15
RAB4AP20338 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB4AP20338 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB4AP20338 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB4AP20338 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB4AP20338 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB4AP20338 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB4AP20338 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB4AP20338 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.13□□□□□ -0.15
RAB4AP20338 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB4AP20338 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB4AP20338 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.13□□□□□ -0.15
RAB4AP20338 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB4AP20338 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RAB4AP20338 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.13□□□□□ -0.15
RAB4AP20338 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB4AP20338 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB4AP20338 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB4AP20338 AF213884.3-201ENST00000563833 479 ntBASIC14.13□□□□□ -0.15
RAB4AP20338 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB4AP20338 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAB4AP20338 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB4AP20338 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB4AP20338 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB4AP20338 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB4AP20338 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB4AP20338 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB4AP20338 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAB4AP20338 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
RAB4AP20338 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms