Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFRSF1BP20333 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFRSF1BP20333 AC128676.1-201ENST00000454392 318 ntBASIC17.17■□□□□ 0.34
TNFRSF1BP20333 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF1BP20333 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFRSF1BP20333 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.17■□□□□ 0.34
TNFRSF1BP20333 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
TNFRSF1BP20333 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF1BP20333 AC008622.2-201ENST00000617006 1229 ntBASIC17.17■□□□□ 0.34
TNFRSF1BP20333 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF1BP20333 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF1BP20333 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF1BP20333 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF1BP20333 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFRSF1BP20333 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF1BP20333 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.17■□□□□ 0.34
TNFRSF1BP20333 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF1BP20333 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFRSF1BP20333 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFRSF1BP20333 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 FAM207BP-201ENST00000447172 505 ntBASIC17.16■□□□□ 0.34
TNFRSF1BP20333 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 MIR4651-201ENST00000582622 73 ntBASIC17.16■□□□□ 0.34
TNFRSF1BP20333 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFRSF1BP20333 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 LINC00896-202ENST00000609602 2128 ntBASIC17.15■□□□□ 0.34
TNFRSF1BP20333 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 AC130371.2-201ENST00000619443 611 ntBASIC17.15■□□□□ 0.34
TNFRSF1BP20333 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 AL031985.4-201ENST00000642138 673 ntBASIC17.15■□□□□ 0.34
TNFRSF1BP20333 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF1BP20333 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TNFRSF1BP20333 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TNFRSF1BP20333 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 AF186192.3-201ENST00000583427 947 ntBASIC17.14■□□□□ 0.33
TNFRSF1BP20333 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms