Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GAP43P17677 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GAP43P17677 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
GAP43P17677 GMCL1P1-201ENST00000463439 1581 ntBASIC20.34■□□□□ 0.85
GAP43P17677 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GAP43P17677 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GAP43P17677 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GAP43P17677 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
GAP43P17677 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
GAP43P17677 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GAP43P17677 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GAP43P17677 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GAP43P17677 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GAP43P17677 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
GAP43P17677 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.33■□□□□ 0.85
GAP43P17677 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GAP43P17677 YBX1P2-201ENST00000489612 999 ntBASIC20.33■□□□□ 0.85
GAP43P17677 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.33■□□□□ 0.85
GAP43P17677 AL441883.1-201ENST00000566170 1045 ntBASIC20.33■□□□□ 0.85
GAP43P17677 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.33■□□□□ 0.85
GAP43P17677 AC139887.4-201ENST00000607877 719 ntBASIC20.33■□□□□ 0.85
GAP43P17677 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GAP43P17677 BICD1-207ENST00000551848 1962 ntBASIC20.33■□□□□ 0.84
GAP43P17677 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GAP43P17677 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.33■□□□□ 0.84
GAP43P17677 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GAP43P17677 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GAP43P17677 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.33■□□□□ 0.84
GAP43P17677 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GAP43P17677 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.33■□□□□ 0.84
GAP43P17677 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.32■□□□□ 0.84
GAP43P17677 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.32■□□□□ 0.84
GAP43P17677 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GAP43P17677 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.32■□□□□ 0.84
GAP43P17677 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GAP43P17677 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
GAP43P17677 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GAP43P17677 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GAP43P17677 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GAP43P17677 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GAP43P17677 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.32■□□□□ 0.84
GAP43P17677 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.32■□□□□ 0.84
GAP43P17677 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
GAP43P17677 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.32■□□□□ 0.84
GAP43P17677 AC011558.1-201ENST00000623459 338 ntBASIC20.32■□□□□ 0.84
GAP43P17677 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.32■□□□□ 0.84
GAP43P17677 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
GAP43P17677 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.32■□□□□ 0.84
GAP43P17677 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.32■□□□□ 0.84
GAP43P17677 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GAP43P17677 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.32■□□□□ 0.84
GAP43P17677 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GAP43P17677 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GAP43P17677 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.32■□□□□ 0.84
GAP43P17677 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GAP43P17677 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
GAP43P17677 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GAP43P17677 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GAP43P17677 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GAP43P17677 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GAP43P17677 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
GAP43P17677 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
GAP43P17677 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
GAP43P17677 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
GAP43P17677 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
GAP43P17677 AC117947.1-201ENST00000427448 529 ntBASIC20.31■□□□□ 0.84
GAP43P17677 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GAP43P17677 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GAP43P17677 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
GAP43P17677 AL157888.1-201ENST00000631930 593 ntBASIC20.31■□□□□ 0.84
GAP43P17677 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GAP43P17677 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GAP43P17677 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.31■□□□□ 0.84
GAP43P17677 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
GAP43P17677 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GAP43P17677 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GAP43P17677 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.31■□□□□ 0.84
GAP43P17677 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GAP43P17677 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.31■□□□□ 0.84
GAP43P17677 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GAP43P17677 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
GAP43P17677 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GAP43P17677 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GAP43P17677 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.3■□□□□ 0.84
GAP43P17677 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
GAP43P17677 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.3■□□□□ 0.84
GAP43P17677 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
GAP43P17677 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GAP43P17677 AC135050.7-201ENST00000624508 2218 ntBASIC20.3■□□□□ 0.84
GAP43P17677 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GAP43P17677 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
GAP43P17677 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GAP43P17677 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GAP43P17677 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GAP43P17677 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GAP43P17677 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.3■□□□□ 0.84
GAP43P17677 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.3■□□□□ 0.84
GAP43P17677 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.3■□□□□ 0.84
GAP43P17677 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.3■□□□□ 0.84
GAP43P17677 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms