Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.09■□□□□ 0.33
PRKCAP17252 AC008622.2-201ENST00000617006 1229 ntBASIC17.09■□□□□ 0.33
PRKCAP17252 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRKCAP17252 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRKCAP17252 CYP2D8P-201ENST00000433633 1490 ntBASIC17.09■□□□□ 0.33
PRKCAP17252 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRKCAP17252 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.09■□□□□ 0.33
PRKCAP17252 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.09■□□□□ 0.33
PRKCAP17252 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRKCAP17252 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PRKCAP17252 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRKCAP17252 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.09■□□□□ 0.33
PRKCAP17252 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRKCAP17252 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.09■□□□□ 0.33
PRKCAP17252 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRKCAP17252 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PRKCAP17252 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRKCAP17252 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PRKCAP17252 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRKCAP17252 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRKCAP17252 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PRKCAP17252 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRKCAP17252 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.08■□□□□ 0.33
PRKCAP17252 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PRKCAP17252 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.08■□□□□ 0.32
PRKCAP17252 TSPY14P-201ENST00000303979 915 ntBASIC17.08■□□□□ 0.32
PRKCAP17252 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRKCAP17252 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
PRKCAP17252 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRKCAP17252 CCR12P-201ENST00000446203 998 ntBASIC17.08■□□□□ 0.32
PRKCAP17252 TSPY17P-201ENST00000450329 467 ntBASIC17.08■□□□□ 0.32
PRKCAP17252 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.08■□□□□ 0.32
PRKCAP17252 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.08■□□□□ 0.32
PRKCAP17252 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.08■□□□□ 0.32
PRKCAP17252 NAPSB-206ENST00000562112 1266 ntBASIC17.08■□□□□ 0.32
PRKCAP17252 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRKCAP17252 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.08■□□□□ 0.32
PRKCAP17252 AC010947.1-201ENST00000623454 693 ntBASIC17.08■□□□□ 0.32
PRKCAP17252 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.08■□□□□ 0.32
PRKCAP17252 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRKCAP17252 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PRKCAP17252 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRKCAP17252 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRKCAP17252 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRKCAP17252 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRKCAP17252 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRKCAP17252 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PRKCAP17252 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.07■□□□□ 0.32
PRKCAP17252 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
PRKCAP17252 HEIH-201ENST00000623091 1652 ntBASIC17.07■□□□□ 0.32
PRKCAP17252 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRKCAP17252 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRKCAP17252 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRKCAP17252 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.07■□□□□ 0.32
PRKCAP17252 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRKCAP17252 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.07■□□□□ 0.32
PRKCAP17252 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
PRKCAP17252 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
PRKCAP17252 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.07■□□□□ 0.32
PRKCAP17252 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.07■□□□□ 0.32
PRKCAP17252 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.07■□□□□ 0.32
PRKCAP17252 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.07■□□□□ 0.32
PRKCAP17252 EGLN1P1-201ENST00000531623 762 ntBASIC17.07■□□□□ 0.32
PRKCAP17252 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRKCAP17252 AL353719.1-201ENST00000566847 864 ntBASIC17.07■□□□□ 0.32
PRKCAP17252 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.07■□□□□ 0.32
PRKCAP17252 AC116562.4-202ENST00000641738 218 ntBASIC17.07■□□□□ 0.32
PRKCAP17252 AC068587.9-201ENST00000641814 219 ntBASIC17.07■□□□□ 0.32
PRKCAP17252 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PRKCAP17252 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
PRKCAP17252 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
PRKCAP17252 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRKCAP17252 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRKCAP17252 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PRKCAP17252 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PRKCAP17252 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRKCAP17252 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PRKCAP17252 AC124067.4-201ENST00000519691 2379 ntBASIC17.07■□□□□ 0.32
PRKCAP17252 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.07■□□□□ 0.32
PRKCAP17252 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.06■□□□□ 0.32
PRKCAP17252 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 RCC2P3-201ENST00000418112 1537 ntBASIC17.06■□□□□ 0.32
PRKCAP17252 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PRKCAP17252 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.06■□□□□ 0.32
PRKCAP17252 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.06■□□□□ 0.32
PRKCAP17252 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.06■□□□□ 0.32
PRKCAP17252 AC092338.2-201ENST00000568827 1415 ntBASIC17.06■□□□□ 0.32
PRKCAP17252 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.06■□□□□ 0.32
PRKCAP17252 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.06■□□□□ 0.32
PRKCAP17252 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms