Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.1■□□□□ 0.65
HMGA1P17096 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.1■□□□□ 0.65
HMGA1P17096 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.1■□□□□ 0.65
HMGA1P17096 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.1■□□□□ 0.65
HMGA1P17096 AC091304.2-201ENST00000564639 760 ntBASIC19.1■□□□□ 0.65
HMGA1P17096 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGA1P17096 ANO7L1-203ENST00000602586 1720 ntBASIC19.1■□□□□ 0.65
HMGA1P17096 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGA1P17096 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGA1P17096 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGA1P17096 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.1■□□□□ 0.65
HMGA1P17096 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGA1P17096 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGA1P17096 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGA1P17096 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGA1P17096 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HMGA1P17096 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGA1P17096 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.09■□□□□ 0.65
HMGA1P17096 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.09■□□□□ 0.65
HMGA1P17096 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGA1P17096 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGA1P17096 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HMGA1P17096 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HMGA1P17096 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGA1P17096 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.09■□□□□ 0.65
HMGA1P17096 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.09■□□□□ 0.65
HMGA1P17096 AC246785.2-201ENST00000432512 513 ntBASIC19.09■□□□□ 0.65
HMGA1P17096 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HMGA1P17096 AC008687.5-201ENST00000593746 558 ntBASIC19.09■□□□□ 0.65
HMGA1P17096 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGA1P17096 AC099336.1-202ENST00000602961 463 ntBASIC19.09■□□□□ 0.65
HMGA1P17096 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.09■□□□□ 0.65
HMGA1P17096 LINC01126-201ENST00000623515 1646 ntBASIC19.09■□□□□ 0.65
HMGA1P17096 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.09■□□□□ 0.65
HMGA1P17096 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGA1P17096 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.09■□□□□ 0.65
HMGA1P17096 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGA1P17096 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HMGA1P17096 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGA1P17096 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGA1P17096 AC005082.1-201ENST00000413042 2259 ntBASIC19.08■□□□□ 0.65
HMGA1P17096 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGA1P17096 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGA1P17096 AC004870.1-201ENST00000315132 882 ntBASIC19.08■□□□□ 0.64
HMGA1P17096 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGA1P17096 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
HMGA1P17096 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGA1P17096 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.08■□□□□ 0.64
HMGA1P17096 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGA1P17096 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGA1P17096 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGA1P17096 EMBP1-201ENST00000458200 901 ntBASIC19.08■□□□□ 0.64
HMGA1P17096 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGA1P17096 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.08■□□□□ 0.64
HMGA1P17096 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.08■□□□□ 0.64
HMGA1P17096 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGA1P17096 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.08■□□□□ 0.64
HMGA1P17096 AC138894.3-201ENST00000603787 634 ntBASIC19.08■□□□□ 0.64
HMGA1P17096 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.08■□□□□ 0.64
HMGA1P17096 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.08■□□□□ 0.64
HMGA1P17096 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.08■□□□□ 0.64
HMGA1P17096 NSUN5P1-202ENST00000421140 1535 ntBASIC19.08■□□□□ 0.64
HMGA1P17096 NSUN5P2-203ENST00000457352 1529 ntBASIC19.08■□□□□ 0.64
HMGA1P17096 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGA1P17096 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HMGA1P17096 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
HMGA1P17096 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGA1P17096 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGA1P17096 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGA1P17096 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGA1P17096 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGA1P17096 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
HMGA1P17096 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGA1P17096 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGA1P17096 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGA1P17096 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
HMGA1P17096 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HMGA1P17096 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGA1P17096 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGA1P17096 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HMGA1P17096 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGA1P17096 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
HMGA1P17096 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGA1P17096 FAAHP1-202ENST00000446499 1238 ntBASIC19.07■□□□□ 0.64
HMGA1P17096 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
HMGA1P17096 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGA1P17096 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGA1P17096 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.07■□□□□ 0.64
HMGA1P17096 AC011840.4-201ENST00000578471 627 ntBASIC19.07■□□□□ 0.64
HMGA1P17096 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGA1P17096 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGA1P17096 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
HMGA1P17096 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGA1P17096 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGA1P17096 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGA1P17096 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGA1P17096 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGA1P17096 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGA1P17096 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGA1P17096 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms