Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.13■□□□□ 0.97
PTPRFP10586 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.13■□□□□ 0.97
PTPRFP10586 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PTPRFP10586 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.13■□□□□ 0.97
PTPRFP10586 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPRFP10586 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
PTPRFP10586 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTPRFP10586 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPRFP10586 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPRFP10586 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPRFP10586 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPRFP10586 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPRFP10586 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PTPRFP10586 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPRFP10586 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.12■□□□□ 0.97
PTPRFP10586 RPL13AP23-201ENST00000480739 586 ntBASIC21.12■□□□□ 0.97
PTPRFP10586 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.12■□□□□ 0.97
PTPRFP10586 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.12■□□□□ 0.97
PTPRFP10586 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PTPRFP10586 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.12■□□□□ 0.97
PTPRFP10586 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.12■□□□□ 0.97
PTPRFP10586 AC010327.4-202ENST00000591484 748 ntBASIC21.12■□□□□ 0.97
PTPRFP10586 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.12■□□□□ 0.97
PTPRFP10586 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPRFP10586 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPRFP10586 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPRFP10586 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PTPRFP10586 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPRFP10586 SDHAP2-201ENST00000455183 2001 ntBASIC21.12■□□□□ 0.97
PTPRFP10586 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPRFP10586 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPRFP10586 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.12■□□□□ 0.97
PTPRFP10586 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC21.12■□□□□ 0.97
PTPRFP10586 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPRFP10586 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.12■□□□□ 0.97
PTPRFP10586 TERC-201ENST00000602385 541 ntBASIC21.12■□□□□ 0.97
PTPRFP10586 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTPRFP10586 AC009102.3-201ENST00000623118 1491 ntBASIC21.11■□□□□ 0.97
PTPRFP10586 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPRFP10586 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTPRFP10586 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPRFP10586 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PTPRFP10586 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPRFP10586 AC093484.2-201ENST00000580996 2166 ntBASIC21.11■□□□□ 0.97
PTPRFP10586 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPRFP10586 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PTPRFP10586 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.11■□□□□ 0.97
PTPRFP10586 TP73-AS1-210ENST00000637775 1455 ntBASIC21.11■□□□□ 0.97
PTPRFP10586 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPRFP10586 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTPRFP10586 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.11■□□□□ 0.97
PTPRFP10586 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PTPRFP10586 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.11■□□□□ 0.97
PTPRFP10586 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.11■□□□□ 0.97
PTPRFP10586 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.11■□□□□ 0.97
PTPRFP10586 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.11■□□□□ 0.97
PTPRFP10586 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.11■□□□□ 0.97
PTPRFP10586 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPRFP10586 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPRFP10586 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.1■□□□□ 0.97
PTPRFP10586 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPRFP10586 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPRFP10586 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PTPRFP10586 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.1■□□□□ 0.97
PTPRFP10586 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.1■□□□□ 0.97
PTPRFP10586 AC034105.1-201ENST00000563488 319 ntBASIC21.1■□□□□ 0.97
PTPRFP10586 CYGB-205ENST00000590175 830 ntTSL 3 BASIC21.1■□□□□ 0.97
PTPRFP10586 MTDHP3-201ENST00000594186 672 ntBASIC21.1■□□□□ 0.97
PTPRFP10586 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PTPRFP10586 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPRFP10586 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPRFP10586 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPRFP10586 PCDHAC2-203ENST00000615316 3011 ntBASIC21.1■□□□□ 0.97
PTPRFP10586 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.1■□□□□ 0.97
PTPRFP10586 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PTPRFP10586 AC021087.4-201ENST00000563761 564 ntBASIC21.1■□□□□ 0.97
PTPRFP10586 MIR5100-201ENST00000579544 119 ntBASIC21.1■□□□□ 0.97
PTPRFP10586 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.1■□□□□ 0.97
PTPRFP10586 AC140113.2-201ENST00000604370 208 ntBASIC21.1■□□□□ 0.97
PTPRFP10586 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.1■□□□□ 0.97
PTPRFP10586 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.1■□□□□ 0.97
PTPRFP10586 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.1■□□□□ 0.97
PTPRFP10586 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.09■□□□□ 0.97
PTPRFP10586 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPRFP10586 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.09■□□□□ 0.97
PTPRFP10586 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPRFP10586 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPRFP10586 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.09■□□□□ 0.97
PTPRFP10586 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPRFP10586 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPRFP10586 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.09■□□□□ 0.97
PTPRFP10586 MIR1233-2-201ENST00000408138 82 ntBASIC21.09■□□□□ 0.97
PTPRFP10586 MIR1233-1-201ENST00000408722 82 ntBASIC21.09■□□□□ 0.97
PTPRFP10586 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.09■□□□□ 0.97
PTPRFP10586 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPRFP10586 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.09■□□□□ 0.97
PTPRFP10586 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPRFP10586 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPRFP10586 AC073130.3-201ENST00000624389 2278 ntBASIC21.09■□□□□ 0.97
PTPRFP10586 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms