Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
CSB-PGBD3P0DP91 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 TP73-AS1-210ENST00000637775 1455 ntBASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 BX842568.4-201ENST00000421222 227 ntBASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 FGFR3P6-201ENST00000457012 610 ntBASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 ANKRD20A8P-203ENST00000641373 517 ntBASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 ZNF259P1-201ENST00000407656 1365 ntBASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CSB-PGBD3P0DP91 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 NFYC-AS1-201ENST00000606277 1687 ntBASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 PIN1-206ENST00000587625 878 ntTSL 2 BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 AC005336.2-201ENST00000593183 939 ntBASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CSB-PGBD3P0DP91 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 MTMR9LP-203ENST00000426597 1545 ntBASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 MED16-201ENST00000269814 1199 ntTSL 5 BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 HNRNPDP1-201ENST00000439535 754 ntBASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC24.36■■□□□ 1.49
CSB-PGBD3P0DP91 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CSB-PGBD3P0DP91 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CSB-PGBD3P0DP91 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CSB-PGBD3P0DP91 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CSB-PGBD3P0DP91 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CSB-PGBD3P0DP91 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC24.35■■□□□ 1.49
CSB-PGBD3P0DP91 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC24.35■■□□□ 1.49
CSB-PGBD3P0DP91 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CSB-PGBD3P0DP91 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC24.35■■□□□ 1.49
CSB-PGBD3P0DP91 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CSB-PGBD3P0DP91 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CSB-PGBD3P0DP91 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
CSB-PGBD3P0DP91 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CSB-PGBD3P0DP91 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC24.35■■□□□ 1.49
CSB-PGBD3P0DP91 SCARNA2-201ENST00000458748 420 ntBASIC24.35■■□□□ 1.49
CSB-PGBD3P0DP91 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CSB-PGBD3P0DP91 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC24.35■■□□□ 1.49
CSB-PGBD3P0DP91 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
CSB-PGBD3P0DP91 AC116407.3-201ENST00000623905 1129 ntBASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms