Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SP9P0CG40 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SP9P0CG40 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SP9P0CG40 AP002472.1-201ENST00000577490 586 ntBASIC18.12■□□□□ 0.49
SP9P0CG40 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.12■□□□□ 0.49
SP9P0CG40 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.12■□□□□ 0.49
SP9P0CG40 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.12■□□□□ 0.49
SP9P0CG40 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.12■□□□□ 0.49
SP9P0CG40 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SP9P0CG40 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SP9P0CG40 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SP9P0CG40 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SP9P0CG40 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SP9P0CG40 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP9P0CG40 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP9P0CG40 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP9P0CG40 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SP9P0CG40 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SP9P0CG40 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
SP9P0CG40 CNN2P11-201ENST00000429351 262 ntBASIC18.11■□□□□ 0.49
SP9P0CG40 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.11■□□□□ 0.49
SP9P0CG40 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.11■□□□□ 0.49
SP9P0CG40 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.11■□□□□ 0.49
SP9P0CG40 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP9P0CG40 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.11■□□□□ 0.49
SP9P0CG40 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.11■□□□□ 0.49
SP9P0CG40 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.11■□□□□ 0.49
SP9P0CG40 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP9P0CG40 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.11■□□□□ 0.49
SP9P0CG40 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.11■□□□□ 0.49
SP9P0CG40 AC106028.4-201ENST00000614509 607 ntBASIC18.11■□□□□ 0.49
SP9P0CG40 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP9P0CG40 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SP9P0CG40 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP9P0CG40 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP9P0CG40 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP9P0CG40 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SP9P0CG40 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SP9P0CG40 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SP9P0CG40 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SP9P0CG40 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP9P0CG40 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP9P0CG40 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP9P0CG40 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SP9P0CG40 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SP9P0CG40 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SP9P0CG40 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.1■□□□□ 0.49
SP9P0CG40 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SP9P0CG40 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SP9P0CG40 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
SP9P0CG40 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SP9P0CG40 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SP9P0CG40 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SP9P0CG40 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SP9P0CG40 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SP9P0CG40 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.1■□□□□ 0.49
SP9P0CG40 KRT18P2-201ENST00000447938 1258 ntBASIC18.1■□□□□ 0.49
SP9P0CG40 COX20P2-201ENST00000452636 358 ntBASIC18.1■□□□□ 0.49
SP9P0CG40 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.1■□□□□ 0.49
SP9P0CG40 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.1■□□□□ 0.49
SP9P0CG40 ALG1L5P-201ENST00000482043 771 ntBASIC18.1■□□□□ 0.49
SP9P0CG40 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.1■□□□□ 0.49
SP9P0CG40 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SP9P0CG40 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SP9P0CG40 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.1■□□□□ 0.49
SP9P0CG40 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SP9P0CG40 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SP9P0CG40 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SP9P0CG40 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SP9P0CG40 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.1■□□□□ 0.49
SP9P0CG40 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SP9P0CG40 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
SP9P0CG40 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.09■□□□□ 0.49
SP9P0CG40 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SP9P0CG40 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SP9P0CG40 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SP9P0CG40 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SP9P0CG40 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.09■□□□□ 0.49
SP9P0CG40 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.09■□□□□ 0.49
SP9P0CG40 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SP9P0CG40 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.09■□□□□ 0.49
SP9P0CG40 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SP9P0CG40 AC009154.2-201ENST00000621177 724 ntBASIC18.09■□□□□ 0.49
SP9P0CG40 MIR1199-201ENST00000621445 119 ntBASIC18.09■□□□□ 0.49
SP9P0CG40 TCF3P1-201ENST00000423021 1937 ntBASIC18.09■□□□□ 0.49
SP9P0CG40 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.09■□□□□ 0.49
SP9P0CG40 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SP9P0CG40 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SP9P0CG40 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SP9P0CG40 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.08■□□□□ 0.49
SP9P0CG40 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
SP9P0CG40 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SP9P0CG40 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
SP9P0CG40 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.08■□□□□ 0.49
SP9P0CG40 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SP9P0CG40 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SP9P0CG40 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SP9P0CG40 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.08■□□□□ 0.49
SP9P0CG40 AC097374.2-201ENST00000618617 1306 ntBASIC18.08■□□□□ 0.49
SP9P0CG40 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms