Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQB2P05538 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DQB2P05538 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQB2P05538 ESPNP-201ENST00000270691 2015 ntBASIC18.71■□□□□ 0.59
HLA-DQB2P05538 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQB2P05538 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQB2P05538 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.71■□□□□ 0.59
HLA-DQB2P05538 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQB2P05538 MIR3180-4-201ENST00000582223 153 ntBASIC18.71■□□□□ 0.59
HLA-DQB2P05538 AC139887.4-201ENST00000607877 719 ntBASIC18.71■□□□□ 0.59
HLA-DQB2P05538 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.71■□□□□ 0.59
HLA-DQB2P05538 AC135050.7-201ENST00000624508 2218 ntBASIC18.71■□□□□ 0.59
HLA-DQB2P05538 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQB2P05538 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HLA-DQB2P05538 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQB2P05538 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQB2P05538 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DQB2P05538 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HLA-DQB2P05538 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQB2P05538 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HLA-DQB2P05538 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HLA-DQB2P05538 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 AC117947.1-201ENST00000427448 529 ntBASIC18.7■□□□□ 0.58
HLA-DQB2P05538 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 MIR3917-201ENST00000580971 93 ntBASIC18.7■□□□□ 0.58
HLA-DQB2P05538 AC006011.2-201ENST00000621313 1158 ntBASIC18.7■□□□□ 0.58
HLA-DQB2P05538 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HLA-DQB2P05538 AC135776.1-201ENST00000319817 2481 ntBASIC18.69■□□□□ 0.58
HLA-DQB2P05538 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 AC020763.4-201ENST00000623414 4170 ntBASIC18.69■□□□□ 0.58
HLA-DQB2P05538 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 RCN1P1-201ENST00000400413 996 ntBASIC18.69■□□□□ 0.58
HLA-DQB2P05538 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 BX664615.1-201ENST00000443558 458 ntBASIC18.69■□□□□ 0.58
HLA-DQB2P05538 YBX1P2-201ENST00000489612 999 ntBASIC18.69■□□□□ 0.58
HLA-DQB2P05538 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 AC011558.1-201ENST00000623459 338 ntBASIC18.69■□□□□ 0.58
HLA-DQB2P05538 AL157888.1-201ENST00000631930 593 ntBASIC18.69■□□□□ 0.58
HLA-DQB2P05538 AC092865.7-201ENST00000641832 219 ntBASIC18.69■□□□□ 0.58
HLA-DQB2P05538 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms