Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CAPNS1P04632 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CAPNS1P04632 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.36■□□□□ 0.53
CAPNS1P04632 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CAPNS1P04632 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CAPNS1P04632 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CAPNS1P04632 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CAPNS1P04632 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPNS1P04632 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPNS1P04632 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPNS1P04632 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPNS1P04632 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPNS1P04632 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPNS1P04632 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CAPNS1P04632 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
CAPNS1P04632 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CAPNS1P04632 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.35■□□□□ 0.53
CAPNS1P04632 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPNS1P04632 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPNS1P04632 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPNS1P04632 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.35■□□□□ 0.53
CAPNS1P04632 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CAPNS1P04632 KRT8P17-201ENST00000453110 1448 ntBASIC18.35■□□□□ 0.53
CAPNS1P04632 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPNS1P04632 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPNS1P04632 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPNS1P04632 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.35■□□□□ 0.53
CAPNS1P04632 AP000523.1-201ENST00000398242 1049 ntBASIC18.35■□□□□ 0.53
CAPNS1P04632 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.35■□□□□ 0.53
CAPNS1P04632 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.35■□□□□ 0.53
CAPNS1P04632 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.35■□□□□ 0.53
CAPNS1P04632 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPNS1P04632 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.35■□□□□ 0.53
CAPNS1P04632 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPNS1P04632 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPNS1P04632 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPNS1P04632 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPNS1P04632 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPNS1P04632 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPNS1P04632 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPNS1P04632 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPNS1P04632 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPNS1P04632 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPNS1P04632 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.34■□□□□ 0.53
CAPNS1P04632 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CAPNS1P04632 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPNS1P04632 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPNS1P04632 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPNS1P04632 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CAPNS1P04632 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPNS1P04632 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPNS1P04632 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPNS1P04632 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPNS1P04632 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CAPNS1P04632 AP002383.4-201ENST00000442518 975 ntBASIC18.34■□□□□ 0.53
CAPNS1P04632 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPNS1P04632 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.34■□□□□ 0.53
CAPNS1P04632 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.34■□□□□ 0.53
CAPNS1P04632 GCSHP2-201ENST00000560971 527 ntBASIC18.34■□□□□ 0.53
CAPNS1P04632 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
CAPNS1P04632 IFNL4P1-201ENST00000607083 540 ntBASIC18.34■□□□□ 0.53
CAPNS1P04632 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPNS1P04632 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPNS1P04632 AC141586.3-201ENST00000562166 1838 ntBASIC18.34■□□□□ 0.53
CAPNS1P04632 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CAPNS1P04632 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPNS1P04632 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPNS1P04632 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPNS1P04632 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPNS1P04632 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPNS1P04632 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.34■□□□□ 0.53
CAPNS1P04632 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPNS1P04632 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CAPNS1P04632 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.33■□□□□ 0.53
CAPNS1P04632 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPNS1P04632 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPNS1P04632 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.33■□□□□ 0.53
CAPNS1P04632 AC016734.2-201ENST00000624325 1377 ntBASIC18.33■□□□□ 0.53
CAPNS1P04632 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPNS1P04632 KRT18P1-202ENST00000452408 1331 ntBASIC18.33■□□□□ 0.53
CAPNS1P04632 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.33■□□□□ 0.52
CAPNS1P04632 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.33■□□□□ 0.52
CAPNS1P04632 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.33■□□□□ 0.52
CAPNS1P04632 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPNS1P04632 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.33■□□□□ 0.52
CAPNS1P04632 SPDYE15P-201ENST00000424157 909 ntBASIC18.33■□□□□ 0.52
CAPNS1P04632 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.33■□□□□ 0.52
CAPNS1P04632 NEK4P2-201ENST00000580004 1012 ntBASIC18.33■□□□□ 0.52
CAPNS1P04632 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.33■□□□□ 0.52
CAPNS1P04632 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CAPNS1P04632 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPNS1P04632 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.33■□□□□ 0.52
CAPNS1P04632 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPNS1P04632 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.33■□□□□ 0.52
CAPNS1P04632 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPNS1P04632 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CAPNS1P04632 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPNS1P04632 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CAPNS1P04632 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CAPNS1P04632 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms